| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0206 |
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| Symbol | |
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| ID | 5079083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 226071 |
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| End bp | 226898 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640497326 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001181741 |
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| Protein GI | 146291317 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAA CCTTACCGAC ATTAAAGCAG GAGTGCCTTG CCGAATTTCT GGGCACCGGA
CTCTTTCTGT TTCTTGGTAT CAGTTGCCTC GCAGCGATGA AACTGGCTGC CGCCAGTTTC
GGTTTGTGGG AGATCTGTAT TGTCTGGGGA CTGAGTGTCG CACTCGGTGT TTACCTCACT
GCGGGAATAT CCGGAGGGCA TCTTAATCCG GCAGTCACTA TCGCATTGTG GCTTTTCGGC
AATTTCAGTG CCCATAAGGT CTTACCTTAC ATCCTGTGCC AGATTATGGG CGCTTTTGGC
GGCGCCATGG TGGTCTACCT GCTTTACCAC AATCTGTTTA TTGATTATGA GCTGGCACAC
CATATTCAAC GCGGCAGCAT GGACAGCCTT GCACAGGCGG GTATTTTCAC GACGTTTCCC
CATCCGGAAA TTAATCTGCT TCAGGCTTTT GCCAGTGAAA CCATCGGAAC GCTGACGCTG
ATGTGCCTGA TCATGGCGCT GACCGACGAC GGCAACGGTG TTCCTCGCGG TCCGCTGGCG
CCGCTACTGA TTGGGATTTC CGTGGCCCTG ATTGGGGTTG CCATCGGTGC ACTGACGGGT
TTTGCGCTGA ATCCGGCAAG GGATTTAGGT CCCCGTCTGT TCAGCTATCT GGCTGGCTGG
GGTAGTAATG CTTTAACAGG CGGACGTGCA TTCCCCTACT TCATTATACC ACTCGTCGCA
CCGATCTTCG GAGCCTGCCT TGGCGCCGCG CTGTATCGCG GTCTGACCAG GTTACCACTT
CTGCCGGGCA AGGGGGGCCA GGGAAAAAGT CTGTCGCTGC CGGAATAA
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| Protein sequence | MNTTLPTLKQ ECLAEFLGTG LFLFLGISCL AAMKLAAASF GLWEICIVWG LSVALGVYLT
AGISGGHLNP AVTIALWLFG NFSAHKVLPY ILCQIMGAFG GAMVVYLLYH NLFIDYELAH
HIQRGSMDSL AQAGIFTTFP HPEINLLQAF ASETIGTLTL MCLIMALTDD GNGVPRGPLA
PLLIGISVAL IGVAIGALTG FALNPARDLG PRLFSYLAGW GSNALTGGRA FPYFIIPLVA
PIFGACLGAA LYRGLTRLPL LPGKGGQGKS LSLPE
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