Gene Sputcn32_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0196 
Symbol 
ID5079073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp218242 
End bp218754 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content49% 
IMG OID640497316 
Productlipoprotein signal peptidase 
Protein accessionYP_001181731 
Protein GI146291307 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTT TTGGCAAACA TCTGTCACCG TACGCTCTGT TGTCCATCTC CGGCCTGCTG 
GCAGCGTCTG ATCAGGCCGT AAAATGGCTG GTGCAACAAT CAATGGCATA TGGCGAGTCT 
ATTTCAGTGA CCTCATTCTT TAACTGGGTA CACGTATGGA ATACCGGTGC CGCATTCAGT 
CTTTTTGCGA ATGGTGGAGG CTGGCAGCGC TACTTTTTTA TCGGAATCGC GGTAGTGGTC 
TCGATTTTTC TGATCAAGCT GATCCTTGAA AATCGTCATA AAGGAGAAGC CATCGCTTGC 
AGTCTTATCC TCGGTGGCGC CATGGGCAAC CTGATTGACC GGGTCTTTCG CGGCTATGTT 
GTGGATTCCT TTGATTTCTA TTGGCGAGAC TGGCATTGGC CGGCCTTCAA CCTGGCTGAT 
ATTGCAATTG TCCTCGGTGC CTTACTTTTA GTTTCCAGCA GCTTGTTGGG TAAAAAAGCA 
AACACCAATG CCGAGCCGGA TGGATCTGAC TGA
 
Protein sequence
MSIFGKHLSP YALLSISGLL AASDQAVKWL VQQSMAYGES ISVTSFFNWV HVWNTGAAFS 
LFANGGGWQR YFFIGIAVVV SIFLIKLILE NRHKGEAIAC SLILGGAMGN LIDRVFRGYV 
VDSFDFYWRD WHWPAFNLAD IAIVLGALLL VSSSLLGKKA NTNAEPDGSD