Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0192 |
Symbol | |
ID | 5079069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 212811 |
End bp | 215891 |
Gene Length | 3081 bp |
Protein Length | 1026 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640497312 |
Product | transposase Tn3 family protein |
Protein accession | YP_001181727 |
Protein GI | 146291303 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATG ATGTTCGGCG GCTATCTATT TTGTCAACTG ATGAAATAGA TGAACTGTTT GGATTACCTC ATTTCTCAGA TGATGATCGT CGATTATATT TTGACTTAAG TGCTAAAGAG CGCGAGCTAT TCGACAATAC CCGAACGTTT TCTGTGGCAG CCCATTTAGT ATTGCAACTG GGCTATTTCA AAGCCAAACG GCAGTTTTTC AGTTATGAAC AAGAATCGTC AGTACTAAAT GACTTGGATT ACATTGCCGC GCTGTACTTT CCCACCAAAA CGCTTTCAAG ACTGAAAAGT CCCTCAAGAC CGATTAGGGC TGAACAACAA CGAGCAATTC TTGATTTATT CCAGTATAAA CAATGTGATA ATGAGGTAAA AGTTGATTTG GAAGATAAAG CACAGCGGGT TGCGATGTTA TCGACACAAC CTATCTTTAT CTTTCGTGAA TTAACCCAAT ACTTAGCATT ACACCGTATT GTCATGCCCA GTTATCGGTA TATGCAAGAG ATGATTGGTA GAGTGGTGGC TTATGAACGC ACCCGTATTG CTCGATTACT TAGCACTTGC ATGACTTCAC TTATCGATCA GCAATTAGCG GCTTTGCTTC GGGCTGAGTC AGGAGTATTT CGCGTCAGCG CATTAAAACA TGAAGCTAAA GATTTCAGTT ATAAAGAATT GCGACATGAA GTCGCACGGC GGCAGTTTTT CCAGCCTCTA CATGAGTTTG CCAAGCAGTT CCTCATAACA GCGGGGATCT CCAATGAAAG CGGCAAGTAT TATGCTTCTA TGGTTAAGTT TTATACCACT TATAAACTTC AACGCATGAA AAAAGAGACT GCTCAGTTAT ATCTGCTGTT TTTTGCTTTT CATCGGTTTC AGCAAATTAA TGACAACTTA ATTGAAGCAT TGCTCCATTG GGTCGATCAA TACGAGAAAC AGGCCAAGCG TGCCGCTGAA GAAGCAATGA ATAATGCGGT TACCAATGCA GCGAAAAATT TACAGGCTGC GGGTCATGTA TTGAGCCTGT TTACGGATGA CACCATCACC GATGACACAC CTTTTTCCAT TATTAAAGAA AAAGCCTATG CATTGCTTGA ACAAGAGAGA TTCCCATTAG TTGCTGATTA CTTACGCAAT ATTGCTTTCG ACAAAACGGC ATTTGAATGG TCACATTACA CAAAATTATC CGCCACATTC AAACGTAACT TAAGGCAACT TTTTACTGAT CTGGATTTTG CCGGACGTGT AGAAGACTCT CCTTTGCTTG AAGCTATCGC GTTTTTACAA AACTTATTGC GCACAGAAAA ATCACCAAGG CAAACTGACC CTAATTCATT TCCGACTGAG ATTATTCCTA AAGGTTTACG CCGATATTTG TTTAGTAAAG AGGGCAAAAC ATTTAAAACG CTTGATGTAG ATCGCTATGA GTTTTTGGTC TATCGCCTAC TACGCAACTC ACTGGAAGCG GGTGATGTGT ACGTTAAACA TAGTAATGAA TTTCGCCGCT TTGAAGATGA CTTAATAAGC GATCTTAGAT GGCAGGATAA AGAACGAGTA TTGCAAGATA TTGGTGCACC CATTTTATTG GCCCCTATCC AAGATACTCT GGCTGTATTT CATACTATGC TAGCAGCACG TTATAGTGCG ATTAACCAAC ATATTTCTGA TGGGGTCAAC AAACATATTA AAGTAATTGG GGCTGCCGAA AAGCGTCGTT GGAAGCTGCT TTATCCGAGC AGTGATGAAT CCGTTAATAG CGATTTTTAC AGCCAGTTAC CAGGAATTGG TATTGCGGAT CTACTGTGGT TTGTTGCGGG TAATACTGGA TTTTTAAATG CATTTACCCA TGTATTAGAT CGTTATGTAA AGCATGAAGC TGATCCCCGT GAAATTTTCG CCTGTATTGT TGCGATGGGA ACAAACATGG GGTTAGCAAA AATGGCTGAG GTTTCAGGCC TTAGCTCAGC ATCAATGGCG GGGACATCAA GAAATTATCT ACGCTTGGAG ACATTACGAG CGGCTAATGA TGCGATTAGT AATGCGACCA GCCAGCTACC CGCATTTCAT CTCTATGATA TTCAGGACAC ACTTCATTCA AGTAGCGATG GTCAGCGGAT AGAAACGCAA ATTAACACCC TTAACGCTCG ATATTCTCCC AAGTATTTTG GTTTACAGAA AGGTGTCAGC GCCTACACGT TGGTTGCAAA TCATGTTCCT ATAAATGCAA AGATTATTGG GACTCACGAA CATGAAAGCC ATTACGTTTT CGATTTATTG CATAACAATA CCTCTGATAT AAAGCCAGAA CGGCATTCCA CTGACACCCA TGGCACCAAT CAGGTTAATT TTTGGATTTT GCATGCATTT GGATATCATT TTGCACCTCG TTATCGTGAT TTGCATAAGA AAATGGATAC GTTAGTCGGC TCACAACATC CCAATGAGTG TGGTGACTGG CTAATAAAGC CTGCCCGAAA AACCAACGAT GAATTGATTG AACGTGAATG GCCCAATATT CAACGGATCA TGGCATCGCT AGCTCAAAAA GATGTTACTC AAGCCACGAT TGTTCGCAAA CTCTCGAGCT ATTCGCGTCA GAATCAGACC AAGAAAGCAT TATGGGAGTT GGAAAACATA TGCCGAACGC TATACATTCT CGACTTTGTC GACGATGTTG GCTTACGTCA ATGTGTACAA AAAGCATTAA ATCGTGGCGA AGCCTATCAT CGTCTTAGAC GAGCAGTTGC ATTTGTTAAC GGTGGAAAAT TCAGAGTAAA AACAGAAGAG GAGCAGCAAA TATGGAATGA ATGCTCTCGG CTCATCACCA ACGCGGTCAT TTACTACAAC ACAGTGCTGC TATCTCGTGT CTATGAACAG AAGCAAACAG TAGGAGATCA AAATGCACTG GCTCAGCTTC ACAGTATTTC GCCCGTTGCA TGGCAGCACA TCAATATGTA TGGCAATTTT GAGTTTAGTC CATCAACCTC AAAAATAGAT ATCGATGCAT TGGTTGCTCG ATATGCTGAA CCAGAATATT GGAAGCAAGC GCTGATTGAG AACGAGAATT CAAGTGAGTG A
|
Protein sequence | MKNDVRRLSI LSTDEIDELF GLPHFSDDDR RLYFDLSAKE RELFDNTRTF SVAAHLVLQL GYFKAKRQFF SYEQESSVLN DLDYIAALYF PTKTLSRLKS PSRPIRAEQQ RAILDLFQYK QCDNEVKVDL EDKAQRVAML STQPIFIFRE LTQYLALHRI VMPSYRYMQE MIGRVVAYER TRIARLLSTC MTSLIDQQLA ALLRAESGVF RVSALKHEAK DFSYKELRHE VARRQFFQPL HEFAKQFLIT AGISNESGKY YASMVKFYTT YKLQRMKKET AQLYLLFFAF HRFQQINDNL IEALLHWVDQ YEKQAKRAAE EAMNNAVTNA AKNLQAAGHV LSLFTDDTIT DDTPFSIIKE KAYALLEQER FPLVADYLRN IAFDKTAFEW SHYTKLSATF KRNLRQLFTD LDFAGRVEDS PLLEAIAFLQ NLLRTEKSPR QTDPNSFPTE IIPKGLRRYL FSKEGKTFKT LDVDRYEFLV YRLLRNSLEA GDVYVKHSNE FRRFEDDLIS DLRWQDKERV LQDIGAPILL APIQDTLAVF HTMLAARYSA INQHISDGVN KHIKVIGAAE KRRWKLLYPS SDESVNSDFY SQLPGIGIAD LLWFVAGNTG FLNAFTHVLD RYVKHEADPR EIFACIVAMG TNMGLAKMAE VSGLSSASMA GTSRNYLRLE TLRAANDAIS NATSQLPAFH LYDIQDTLHS SSDGQRIETQ INTLNARYSP KYFGLQKGVS AYTLVANHVP INAKIIGTHE HESHYVFDLL HNNTSDIKPE RHSTDTHGTN QVNFWILHAF GYHFAPRYRD LHKKMDTLVG SQHPNECGDW LIKPARKTND ELIEREWPNI QRIMASLAQK DVTQATIVRK LSSYSRQNQT KKALWELENI CRTLYILDFV DDVGLRQCVQ KALNRGEAYH RLRRAVAFVN GGKFRVKTEE EQQIWNECSR LITNAVIYYN TVLLSRVYEQ KQTVGDQNAL AQLHSISPVA WQHINMYGNF EFSPSTSKID IDALVARYAE PEYWKQALIE NENSSE
|
| |