| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0175 |
|---|
| Symbol | |
|---|
| ID | 5079052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 201013 |
|---|
| End bp | 201438 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640497295 |
|---|
| Product | putative prophage repressor |
|---|
| Protein accession | YP_001181710 |
|---|
| Protein GI | 146291286 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTA TTCCTATTCC CGCTCATGCG GGTATTACTG GTTTTGAAAG CCCCGCGGCT
GAATATACTC AGCTTGGGCT AAGCCTTGAT GAATTGCTTA TCACGCATCC CAATGCCAGT
TTTTTATGTC TGGCGGAGGG GGATTCAATG CAAGACGTTG GGATTTATGA TGGTGATGTA
TTAATCGTTG ACCGCCATGA AACCGCCCGC AATGGTGATG TGATAGTCGC AAATTTTAAC
GGGCTTTTTG TCTGTAAACT TATCGATACC CAAAGGCGTT TGTTATTGTC ATGTAATGAA
CAATATCAGC CAGTATCGGT GCATGAATAC GATGAGTTTA GTATCGAAGG TGTGGTTACA
CGCTCTATTC GTTGTCATCG TCCTAGTCCG TTTGATCCGT ACCAACACTT TTGGACACTT
TGCTAA
|
|---|
| Protein sequence | MRVIPIPAHA GITGFESPAA EYTQLGLSLD ELLITHPNAS FLCLAEGDSM QDVGIYDGDV
LIVDRHETAR NGDVIVANFN GLFVCKLIDT QRRLLLSCNE QYQPVSVHEY DEFSIEGVVT
RSIRCHRPSP FDPYQHFWTL C
|
|---|
| |