| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0173 |
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| Symbol | |
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| ID | 5079050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 199833 |
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| End bp | 200648 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640497293 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001181708 |
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| Protein GI | 146291284 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGCGG TGCTTCAGGT GTCGCGTAGT GGGTATTATG CCTGGCGTAA AACGGGCCTG
ACACCAAGCC CGAGGGCTGC GAAGCGTGCA AAGCGTGACG TGCTGATAAA GAAGGCGTTT
GACGACTCCA AAGCACGTAA TGGCTCCAGA CGTATTCAGG TAGACCTTGC TGAGCATGGC
AAGAAACCGG ATATAAAAAC CATACTGAAC AGCATGGAGC GCCAGGGTTT AGTGGCTAAA
GCGGCCCGCA AGTTTAAAGT GACGACCGAC AGCAAGCATT CGCTGCCAGT AGCCCCAAAC
TTGCTTGAAC AGGATTTTAG CGCAACAGGC CCGAACCAAA AATGGGTCGG TGATATCACG
TACCTGATGA CCAGCGAAGG CTGGCTGTAT CTGGCGGTAA TCATTGATCT GTACTCGCGG
GCAGTAATTG GCTGGTCGAT GAGCAACCGT ATGACAGCAG ATCTGGTGTG CAGCGCATTG
AACATGGCGT TGTTCCGTCG CGGCTTCCCT AAATCGGTGA TCGTTCATAG TGATCGCGGC
AGCCAGTATT GCTCGCATGA TTACCGTGAC TTGATTAAAA AGCACCAGTT GCTACAAAGC
ATGAGCCGTA AAGGCAACTG CTGGGACAAT GCGGTAGCGG AAAGCTTCTT CCATTCATTG
AAGGTTGAAA CGCTTCAGGA CGAGCCGATA ATGGATCGGG AAACAATGCG CCAACACGTT
TTTGAATACA TTGAGGTTGA TTACAATAAG ACCAGAAGGC ATAGTGCTCT TGGCTATCTT
AGCCCAGAGA ATTTTGAATT GAAGAACAGT GCTTAG
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| Protein sequence | MVAVLQVSRS GYYAWRKTGL TPSPRAAKRA KRDVLIKKAF DDSKARNGSR RIQVDLAEHG
KKPDIKTILN SMERQGLVAK AARKFKVTTD SKHSLPVAPN LLEQDFSATG PNQKWVGDIT
YLMTSEGWLY LAVIIDLYSR AVIGWSMSNR MTADLVCSAL NMALFRRGFP KSVIVHSDRG
SQYCSHDYRD LIKKHQLLQS MSRKGNCWDN AVAESFFHSL KVETLQDEPI MDRETMRQHV
FEYIEVDYNK TRRHSALGYL SPENFELKNS A
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