Gene Sputcn32_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0163 
Symbol 
ID5079040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp191300 
End bp191968 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content42% 
IMG OID640497283 
Producthypothetical protein 
Protein accessionYP_001181698 
Protein GI146291274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGGCA ATTATCCCAA AGTCGTAAAA CAAACTGTAA ATTTAGGCAG CCTGCCTTAC 
GTATCGAGTG TTGATGAGGA AGGTCAACGC ACTATTGCTT TTCATGAAGA TCACATTATT 
GAACGTTTCC CTAGAGTGTT ATCACTGGTT CGAATTCAGG ACACTCTCGA AATCAATTTA 
TTCTTAGAGC ACAGATATAA AGGGCTTTTT ATGCCGCCTA AACGTGGCGG TAAAAAGAAC 
CCTCTTGGTG GCGTGTCGCT TATTACTGTG CAGTCATTGG CAAATTCGAT GAGTTTGTTT 
TTGCAATGGG TTGAGAAGAA TAACTTGGAC TGGCATGAGG TTTATGCCGT AAGTGACAGT 
GATAAAGCGA AATATTGGCT TCCTGTGTAC CGCTATCGCA AGCACCTTAT AGAACAAGTG 
ATTGCAAAGG ATATCGACCG AGATACGGCA AACCTATACA TCAACCATGT TAGGCAGTTT 
TACGAGTGGG CAAGAAAGCA ACGCAGAATT GATAAAGTGC CATTCAAATA TAAAACCAAG 
GTCATTAAGA AAAAGCGCAA AGATGGCGGT TTAGATTTGC TGTTTACCGA CTACGGGAGT 
GAGGAAAAAG GCTTTGCCAT TACCACGACT GATTTGCTGA TCCCTAAATG TAGTGGCTCG 
CAAACATAA
 
Protein sequence
MSGNYPKVVK QTVNLGSLPY VSSVDEEGQR TIAFHEDHII ERFPRVLSLV RIQDTLEINL 
FLEHRYKGLF MPPKRGGKKN PLGGVSLITV QSLANSMSLF LQWVEKNNLD WHEVYAVSDS 
DKAKYWLPVY RYRKHLIEQV IAKDIDRDTA NLYINHVRQF YEWARKQRRI DKVPFKYKTK 
VIKKKRKDGG LDLLFTDYGS EEKGFAITTT DLLIPKCSGS QT