| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0162 |
|---|
| Symbol | |
|---|
| ID | 5079039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 190451 |
|---|
| End bp | 191065 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640497282 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001181697 |
|---|
| Protein GI | 146291273 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAA AAATGCGCCA AGCTGTACAA GAGCTGCGCC TGAGTGATAT TGCCAATATC
CGCTTGGGCC ACCCTTTTCG TGGAACGGTA AAGCAATACG ACAATGGTGA CGTAAATGTT
GTTCAAGTAA GGGATACCGA GCCAACGGGT GAAATCAACC AATACACTAT GGTTGAAACT
GTATTAAAGA CGAAAAAGCA ACCCGACTGG TTAGAAAATG GTGATGTGTT ATTTGTCGCT
AAAGGGGCAA AACATTACAG CGTATTAGTA GAACAGGTAT TAGAGCGCAC AGTCTGCTCA
CCACACTTTT TTATGTTGCG TTTAAAGCCT GAGTTTAAAG ATGTGATCGT GCCCGATTTC
TTGTGCTGGC AACTCAACCA ACAACCTGCA CAGCGTTATT TCAAAGCGAC TGCTGAGGGT
TCAATGTACC TAAGTATTCG CAGGCAAGTG CTGGAGAATG TACCCATTAA GGTACTTAAT
TTTGAGAAGC AAAAACAACT CGCTGCAATG CACCGCTGTG CAGTTAGAGA GCAAAAAGTA
TTACAAAAGC TGATTGAAAA TAGACAGCAA CAAATAGAAG CCATTGCTAT TCATGCACTT
GAAAGCATTG GCTAA
|
|---|
| Protein sequence | MNTKMRQAVQ ELRLSDIANI RLGHPFRGTV KQYDNGDVNV VQVRDTEPTG EINQYTMVET
VLKTKKQPDW LENGDVLFVA KGAKHYSVLV EQVLERTVCS PHFFMLRLKP EFKDVIVPDF
LCWQLNQQPA QRYFKATAEG SMYLSIRRQV LENVPIKVLN FEKQKQLAAM HRCAVREQKV
LQKLIENRQQ QIEAIAIHAL ESIG
|
|---|
| |