| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0150 |
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| Symbol | |
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| ID | 5078976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 175384 |
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| End bp | 176913 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640497270 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001181685 |
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| Protein GI | 146291261 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0999403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAT TTAACCGAGT AAAAAAGCAG GCCCCTAAGG CAGTGCTGCT TTTGAGCAGT
TTACTGATGG GAACACCTTG GCTGAGTCAT GCCCAACTGG CAAATACACA GGCCGAAACC
GCAGCGACTA GCCCAGCCAA TGAATCTAAG AACAACCCAT TAAAGCAAGT CAAAACCTAT
ACTTGCCCAA TGCACCCCGA AGTGATCAGC CATGAGCCAG GCCGCTGCCC TAAGTGCAAT
ATGTTTTTGG TCGAGCAGCA AGATGATGCA AATTCGGCTG AGCATGTAGG ACACCAAGCA
GCAGATCATC AAGCCTCTGA GCATGGGCAA ACCTTAGCAG CCAAGGCTTC GAGTCCGGTA
TTCGACACTC CAACACCTAA GGCCGACAGT TTAGTCAAAA CTCAAAATAA CGTGACAACA
ATCAAGTACG TTTGCCCTAT GCATGCCCAT ATCATCAGTG ATGTGCCTGG CACTTGCCCA
ATCTGTGGCA TGAACTTGGA AAAGGTCGAA ACGGGTGGTA ACACCCAGGA GATCAACATT
CAGGTTTCCG GCAGTATGCA ACAGGCTCTC GCCCTAAAGG TCGCCCAAGT CGAGCGTGAT
ACCCTGTGGA AATTCGTCGA AACCGTCGGA CAAGTAGACT ATAACGAGAG CCAAATTACC
CATATCCACG CAAGGGTCAC AGGCTGGGTC GAAAAGCTCA TGGTCAAATC CATGGGCGAT
ACGGTCAAAA AAGGTCAGTT ACTCTATGAG CTCTATTCAC CCGATTTAGT CAACGCCCAA
GATGATTATC TACTCGCCTT AGATACTGCA AAAACCTCCG GCAACCCAAG ATATCAAGAT
CTGGTGCGCA GAGCGGGATT ACGATTGTCA TTCCTCGGGT TTAATGATGA ACAAATCAAG
CAATTAGCCC AATCGCGCCA AACCCAGTAT CGAGTGCCAT TTTATGCCCA GCAGGATGGT
GTTGTCGAAA CACTCTCTAT CCGCGATGGC ATGTATATTG AGCCATCCAC TGAGGCAATG
TCGTTAGTCG ATCTCTCTAA AGTCTGGGTG ATTGCCGACG TATTTGAGAA TGAGCAAAGC
TGGATTGCCA AGGGGCAAAA GGCCGAAGTC GCCGTCCCCG CCATGAATAT CCGTGGCATC
GAAGGCACTA TCGACTATAT CTACCCTGAA TTGGACCCTG TGACCCGTAG CCTGCGGGTA
CGGGTGGTAC TCAACAATAC TAATGTAGAT TTAAGACCTA AAACTCTCGC TAAAGTCTCC
CTATTCGGTG GCCCCAATAG GGATGTGCTC GTTATCCCAC AGGAAGCCTT AATCCAAACG
GGTAAAGAAA ACCGCGTGAT AGTCAAACAA GACGACAATA GTTTTGCCGC TAAAGTTGTC
ACCGTCGGCA TGATGAGTCA AGGCAAGGCT GAGATTGTCT CGGGTTTAAC CGAGGGAGAG
CGCGTGGTGA TCTCAGGGCA ATTTTTACTC GACTCCGAAG CCAGCCTCAA GGGCAGCTTA
ATGCGTTTAA GCAGCGGTCA TCAGCACTAG
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| Protein sequence | MNQFNRVKKQ APKAVLLLSS LLMGTPWLSH AQLANTQAET AATSPANESK NNPLKQVKTY
TCPMHPEVIS HEPGRCPKCN MFLVEQQDDA NSAEHVGHQA ADHQASEHGQ TLAAKASSPV
FDTPTPKADS LVKTQNNVTT IKYVCPMHAH IISDVPGTCP ICGMNLEKVE TGGNTQEINI
QVSGSMQQAL ALKVAQVERD TLWKFVETVG QVDYNESQIT HIHARVTGWV EKLMVKSMGD
TVKKGQLLYE LYSPDLVNAQ DDYLLALDTA KTSGNPRYQD LVRRAGLRLS FLGFNDEQIK
QLAQSRQTQY RVPFYAQQDG VVETLSIRDG MYIEPSTEAM SLVDLSKVWV IADVFENEQS
WIAKGQKAEV AVPAMNIRGI EGTIDYIYPE LDPVTRSLRV RVVLNNTNVD LRPKTLAKVS
LFGGPNRDVL VIPQEALIQT GKENRVIVKQ DDNSFAAKVV TVGMMSQGKA EIVSGLTEGE
RVVISGQFLL DSEASLKGSL MRLSSGHQH
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