| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0149 |
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| Symbol | |
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| ID | 5078975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 172225 |
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| End bp | 175374 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497269 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001181684 |
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| Protein GI | 146291260 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAT ACATTATCGA AGCCTCCATC AGACAACGAC TTATGGTGTT GATCATCGCC
ATCATGATCA CCGTCTGGGG CGTACAAGAG TTGCGCAAAA CGCCACTCGA TGCATTGCCC
GATCTGTCGG ATGTGCAGGT GATTATTAAA ACGTCCTACC CAGGGCAAGC GCCTAAATTG
GTAGAAGAAC AAGTCACTTA TCCTTTATCT ACCGCCATGT TAGCCGTACC CGGTGCCAAG
ACGGTTCGGG GATTCTCGAT GTTTGGTGAC TCCTATGTCT ATGTGATTTT TGAAGATGGC
ACCGACATCT ACTGGGCGCG ATCACGGGTA TTGGAATACT TAAATCAGAT CAGTAGCCGC
TTGCCACAGG GCGTACAACC GTCACTTGGC CCAGATGCCT CTGGTGTTGG CTGGGTGTAT
GAATATGCAC TGGTCGATCG CTCGGGCAGT TTAGATTTAT CGCAGCTCAA AAGCCTGCAG
GACTGGTATC TTAAATTAGA GCTACAAAGC GTGGCTGGCG TGTCTGAAGT CGCAACCGTC
GGTGGCATGG AGCAGACCTA TCAGATTGTG CTCGAACCCG ACAAAATGGC GATCTATAAA
CTGGATATCG CCAGCATTAA AGATGCGATA GAAAAATCTA ATAGCGAAGC GGGTGGCTCG
GTCATTGAGA TGGCTGAAGC CGAGTATATG GTGCGCGCCA AAGGGTATCG TCAAACCCTT
GAGGATTTCC GCGAAATTCC ATTAGGCATC ACCAGTCCTT CTGGCACAGG TCTATTACTG
AAAGATGTTG CTACCGTGCG CAAAGGCCCG GCCTCACGCC GCGGTATAGC CGAACTCGAT
GGTGAAGGTG AAGTCGTAGG CGGCATTATT GTGATGCGTT ACGGCGAAAA TGCTTTATCC
ACGATTGATG CCGTAAAAGC TAAGCTTGAA GAACTGAAAG CTGGTTTACC CGATGGGGTT
GAAATCATCC CCACCTACGA CAGATCCCAA CTCATTCTAA AATCCGTTGA TAACCTGTTC
AGCAAAGTTG TCGAAGAGAT GCTGGTCGTA GGGCTGGTCT GTCTGCTGTT TTTACTGCAT
GCACGCTCAA CCTTAGTCGC CATCATTACC CTGCCGCTTT CAATCCTGAT TGCCTTTATC
GTAATGAATA AGATGGGGGT GAATGCCAAC ATTATGAGTC TTGGGGGTAT CGCGATTGCC
ATTGGCGCGG TGGTGGACGG CGCAATTGTG ATGATTGAAA ACCTGCACAA ACATTTGGAG
CAGTTTCACA CTGAACACAA CCGAGAACCC GATACCAAAG AACACTGGCG GATCGTCACC
GAAGCCTCGA TTGAGGTTGG CCCAGCACTA TTTTTCTCTT TAATTATTAT TACCTTAAGT
TTTGTACCTG TGTTTGCACT CGAAGCACAG GAAGGCCGTT TATTTGCGCC GCTGGCCTAT
ACCAAATCCT TTGCTATGGC CGCTTCCGCA TTATTAGCAA TCACATTAGT GCCAGTCTTA
ATGGGCTATT TTATTCGGGG AAAAATTCCG AGTGAGCATA AAAATCCCAT CAGTCGCGTG
CTGATCGCTT TATATAAGCC ATCGCTTAAT CTGGTACTTA GGTTTCCTAA AATCACCTTA
GCATTAGCGT TGATTGCCTT AGTCAGCGCT TGGTATCCGA TGACGCGCAT GGGCAGTGAG
TTTATGCCCG AGTTAGAAGA AGGCGATTTA CTCTACATGC CAACCGCGTT ACCAGGACTC
AGTGCGGGCA AAGCCGCCGA AGTGTTACAG CAAACCGATC GTTTGATTAA AACCGTCCCC
GAAGTCGCCC GCGTATTTGG TAAGGTGGGC CGCGCCGAGA CTGCGACTGA TCCCGCGCCG
TTAACTATGC TCGAAACCAC CATCATGCTT AAACCACATG AAGAATGGCG CGAGGGTATG
ACCTTAGATG GCATCATCGC TCAACTGCAA CAAACGGTGA AAGTGCCGGG TATCACGAAT
GCTTGGGTTC AACCCATCAA AACCCGTATC GATATGCTCT CGACTGGAAT AAAAACCCCC
GTTGGCATTA AGATCACCGG CGCCGATGTG AACGAACTAC AAAGCCTAGG AGCTGAAATA
GAGGCCATTC TCAGTAGAGT GCCACACACT AAGTCGGCCT ATGCCGAACG CAGTGGCGGC
GGGCGTTATA TCGATATCAC CCCAAAACTC GATGTGGCTG CACGTTACGG TATGTCATTG
CAGGATATTC AAGATGTAGT ACGTTACGCC ATTGGCGGTA TGGATATTGG TGAATCGATA
CAAGGGGCTG AGCGTTATCC CATCAACCTA CGTTATCCCC GTGAGCTACG CGATAATATC
GAGAAGCTAC GTGAACTCCC TGTGATCACT AAATCGGGAA ATTACCTGCC ACTGCGAAAT
TTAGCGGATA TCGAAATCAC CGATGGCGCA CCTATGCTCA CCAGTGAAAA CGGTCGCTTA
ATCTCTTGGG TGTTTATCGA TATTGAAGGC ACGTCTATCG GCGAATATAT TACTACTGCC
AAGCAAGCAT TAACTGCCGA ACTTAAAGTG CCCCCGCGCT ACAGCTATAC CTTCGCAGGC
CAGTATGAAT ATATGCAACG GGTAGATGCA AAACTGAAGC AAGTGATCCC TATGGCCTTA
GGTGTGATAT TCATCCTGTT GATGATGACA TTTGGCTCTA CTTTGCAGGC GAGTATTATC
ATGCTCAGCC TCCCATTCGC GCTAGTCGGC AGCACTTGGC TATTGTATCT ACTGGATTAC
AACATCTCAG TCGCCGTCGC AGTCGGTATG ATTGCGTTGG CGGGCGTTGC CGCTGAGTTT
GGGGTAATCA TGCTGATTTA CCTTAATAAT GCGATTAAGC ACAGGCAAGA TAAGAATAAC
TACCATACAG TTACCGATCT CAAAGAAGCT TTAATTGAAG GTGCTGTTAT GCGTATTCGC
CCCAAAGCGA TGACAGTCGC CACTATCTTT TTTGGCCTAC TGCCCATTAT GTGGGGCGCA
GGTTCGGGGA ATGATGTGAT GCAAAAAATC GCCGCACCTA TGGTTGGTGG TATGGTCACA
GCACCAATCC TGTCGCTCTT TGTGCTGCCC GCACTTTATC TATTAATTTA CTCTCGTCAG
TTAAAGAAAG AAGCTGCACC AATAAGTTAA
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| Protein sequence | MLKYIIEASI RQRLMVLIIA IMITVWGVQE LRKTPLDALP DLSDVQVIIK TSYPGQAPKL
VEEQVTYPLS TAMLAVPGAK TVRGFSMFGD SYVYVIFEDG TDIYWARSRV LEYLNQISSR
LPQGVQPSLG PDASGVGWVY EYALVDRSGS LDLSQLKSLQ DWYLKLELQS VAGVSEVATV
GGMEQTYQIV LEPDKMAIYK LDIASIKDAI EKSNSEAGGS VIEMAEAEYM VRAKGYRQTL
EDFREIPLGI TSPSGTGLLL KDVATVRKGP ASRRGIAELD GEGEVVGGII VMRYGENALS
TIDAVKAKLE ELKAGLPDGV EIIPTYDRSQ LILKSVDNLF SKVVEEMLVV GLVCLLFLLH
ARSTLVAIIT LPLSILIAFI VMNKMGVNAN IMSLGGIAIA IGAVVDGAIV MIENLHKHLE
QFHTEHNREP DTKEHWRIVT EASIEVGPAL FFSLIIITLS FVPVFALEAQ EGRLFAPLAY
TKSFAMAASA LLAITLVPVL MGYFIRGKIP SEHKNPISRV LIALYKPSLN LVLRFPKITL
ALALIALVSA WYPMTRMGSE FMPELEEGDL LYMPTALPGL SAGKAAEVLQ QTDRLIKTVP
EVARVFGKVG RAETATDPAP LTMLETTIML KPHEEWREGM TLDGIIAQLQ QTVKVPGITN
AWVQPIKTRI DMLSTGIKTP VGIKITGADV NELQSLGAEI EAILSRVPHT KSAYAERSGG
GRYIDITPKL DVAARYGMSL QDIQDVVRYA IGGMDIGESI QGAERYPINL RYPRELRDNI
EKLRELPVIT KSGNYLPLRN LADIEITDGA PMLTSENGRL ISWVFIDIEG TSIGEYITTA
KQALTAELKV PPRYSYTFAG QYEYMQRVDA KLKQVIPMAL GVIFILLMMT FGSTLQASII
MLSLPFALVG STWLLYLLDY NISVAVAVGM IALAGVAAEF GVIMLIYLNN AIKHRQDKNN
YHTVTDLKEA LIEGAVMRIR PKAMTVATIF FGLLPIMWGA GSGNDVMQKI AAPMVGGMVT
APILSLFVLP ALYLLIYSRQ LKKEAAPIS
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