Gene Sputcn32_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0143 
Symbol 
ID5078969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp162965 
End bp164956 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content47% 
IMG OID640497263 
Productpeptidase M14, carboxypeptidase A 
Protein accessionYP_001181678 
Protein GI146291254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTTT TCATGCGCTT ATTTTCCCTC TCCGTTATCG CCATTGCCTG CCTATCTGCC 
AATCATGTCA GCTTTGCCAA TGAGGTTAAC ACTGTCACTC CTGAAACCGT TGTCACTTCG
GCTCCCCAAG AAGTCGTCCC TTTAAAGGCC ATTGAGAATA CACAAACAAT AGAAACTCAG
AAAAATGTGG CCGTAAATAC TGCCGGAGCC ACCGAAGGAA CTCAGCCAGC ACCTATCCCT
GAGCGCGCCA AGACCTTTGT CAATGATGCT ATTTTACCGC CGAATATCAC ATGGCATGGT
GCCAGCGAAG CCCTGATGCT AAGCATTGAT AACGAATGGG CTACCCCATT TGAACAAAGC
AATGGTATTG AAAGCCCAAG TTACGATGAC ACTATCCTTT GGCTCGACAG ATTGGCGGCT
GAAACCACTA GCTTGCAAAA AGTAAGCTTA GGTAAAAGCC CTCAAGGGCG CGATATTTGG
ATGTATATCG CCAGCAGTGA AGGGATAAGT GAATCAGCAA GCCTTAAGCA AAATACTAAG
CCAACGATTC TTGTACAAGC TGGTATTCAT GCGGGAGAAA TCGATGGTAA AGATGCGGGT
ATGATGTTGC TGCGGGATAT AGTCAAAGGC AACAAAAGCG ACCTGCTCGA AAAAGCCAAC
CTGCTGTTTG TGCCAATATT TAGTGTTGAT GCCCATGAGC GCAGCGGTGA ATTTAATCGC
GTAAATCAAC GTGGCCCAGT GAATATGGGC TGGCGAACTA CGACGAATAA TCTCAACCTT
AACCGCGATT ATGCCAAGGC CGATACCTTG GAAATGCAAC ATATGCTGCG CGCAATCAAT
GTCTGGCAGC CTGATTTGTA TATCGACGTG CATGTTACCG ATGGCATCGA CTATCAGTAC
GATGTCACTT TTGGTTATAA CCTTGCCCAA GGCTTAAGCC CCGCCAGCTA CCGCTGGCTC
GAAAACAGCT ACAGACCAGC CATTGAAGCG GCATTAACCG AGCAAGGGCA TATTCCTGGG
CAGCTAATTT TTGCTGTGGA TAATGCCGAT ATCACTAAAG GTATGTCACT GTGGAATCCA
AGCCCACGCT TTTCAAATGG TTATGGTGAT GCACGCCATT TACCCACCAT TCTGGTTGAA
AACCATAGCC TAAAACCCTT TAAGCAACGG GTGTTAGGCA CTTATGTGAT GCTAGAACAA
ACCCTAAAAA CCGTTGGTGA ACAAGCGACT AAACTGAAAA GCGCGATTCA GGAAGATAAA
TATCGCGCTT CACCGCTGAT CACCCTCACA TGGAAATCAG CACCATTAGA AAAAGGTTGG
GATTTTAAAG GCATAGACTA CAAACTTGAG AAAAGCCCTA TTAGTGGCGC CGATGTCGTG
CGCTGGACGG GTGAACCTAA ACTCTACCCT AACTTACCTG TGATGGCAGA AACCGTGCCC
GATCTTAAGG TCACCCGCCC GAGTGCTTAC TATATCCCTG CCCAGTGGAC ACAGGTCATT
GATCGACTGA ACCTACATGG CATTCGCATG ACGGCACTCA AAAAGCCCAC TGAGTTGAAA
TTACAGCAAT ACCAACTGAG TCATACAGTG TTTAGTGCTA AGGATTTTGA AGGTCGTCAA
ACGGTAAAAG TGGTGTCGGA GTTAACTAAA CTCACCACTG TTTTGCCCGA AGGCACCATT
AAAGTCAGCA CAGATCAACC TTTAGGTGAT TTAGCGGTGT TATTGCTAGA ACCCCAATCA
CCCGACTCGT TACTGCAATG GGGCTTTTTT AATCCTATCT TTACCCGCAC TGAATATATT
GAAGATTATG CGGTAGAGCC ATTGGCAGCA AAAATGCTGA AAGAAGATCC TAAGTTGCAG
ACAGAGTTCG ACAAAGCACT GACCAATCCA GAATTTGCCG CCGATCCCGA CGCACGTCTG
CGCTGGTTCT ATGAGCGCAG CCCCTACTAC GATAACCAAT ACCTTAAGTA TCCAGTTTAC
CGCAGCCGTT AA
 
Protein sequence
MGFFMRLFSL SVIAIACLSA NHVSFANEVN TVTPETVVTS APQEVVPLKA IENTQTIETQ 
KNVAVNTAGA TEGTQPAPIP ERAKTFVNDA ILPPNITWHG ASEALMLSID NEWATPFEQS
NGIESPSYDD TILWLDRLAA ETTSLQKVSL GKSPQGRDIW MYIASSEGIS ESASLKQNTK
PTILVQAGIH AGEIDGKDAG MMLLRDIVKG NKSDLLEKAN LLFVPIFSVD AHERSGEFNR
VNQRGPVNMG WRTTTNNLNL NRDYAKADTL EMQHMLRAIN VWQPDLYIDV HVTDGIDYQY
DVTFGYNLAQ GLSPASYRWL ENSYRPAIEA ALTEQGHIPG QLIFAVDNAD ITKGMSLWNP
SPRFSNGYGD ARHLPTILVE NHSLKPFKQR VLGTYVMLEQ TLKTVGEQAT KLKSAIQEDK
YRASPLITLT WKSAPLEKGW DFKGIDYKLE KSPISGADVV RWTGEPKLYP NLPVMAETVP
DLKVTRPSAY YIPAQWTQVI DRLNLHGIRM TALKKPTELK LQQYQLSHTV FSAKDFEGRQ
TVKVVSELTK LTTVLPEGTI KVSTDQPLGD LAVLLLEPQS PDSLLQWGFF NPIFTRTEYI
EDYAVEPLAA KMLKEDPKLQ TEFDKALTNP EFAADPDARL RWFYERSPYY DNQYLKYPVY
RSR