Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0143 |
Symbol | |
ID | 5078969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 162965 |
End bp | 164956 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497263 |
Product | peptidase M14, carboxypeptidase A |
Protein accession | YP_001181678 |
Protein GI | 146291254 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTTTT TCATGCGCTT ATTTTCCCTC TCCGTTATCG CCATTGCCTG CCTATCTGCC AATCATGTCA GCTTTGCCAA TGAGGTTAAC ACTGTCACTC CTGAAACCGT TGTCACTTCG GCTCCCCAAG AAGTCGTCCC TTTAAAGGCC ATTGAGAATA CACAAACAAT AGAAACTCAG AAAAATGTGG CCGTAAATAC TGCCGGAGCC ACCGAAGGAA CTCAGCCAGC ACCTATCCCT GAGCGCGCCA AGACCTTTGT CAATGATGCT ATTTTACCGC CGAATATCAC ATGGCATGGT GCCAGCGAAG CCCTGATGCT AAGCATTGAT AACGAATGGG CTACCCCATT TGAACAAAGC AATGGTATTG AAAGCCCAAG TTACGATGAC ACTATCCTTT GGCTCGACAG ATTGGCGGCT GAAACCACTA GCTTGCAAAA AGTAAGCTTA GGTAAAAGCC CTCAAGGGCG CGATATTTGG ATGTATATCG CCAGCAGTGA AGGGATAAGT GAATCAGCAA GCCTTAAGCA AAATACTAAG CCAACGATTC TTGTACAAGC TGGTATTCAT GCGGGAGAAA TCGATGGTAA AGATGCGGGT ATGATGTTGC TGCGGGATAT AGTCAAAGGC AACAAAAGCG ACCTGCTCGA AAAAGCCAAC CTGCTGTTTG TGCCAATATT TAGTGTTGAT GCCCATGAGC GCAGCGGTGA ATTTAATCGC GTAAATCAAC GTGGCCCAGT GAATATGGGC TGGCGAACTA CGACGAATAA TCTCAACCTT AACCGCGATT ATGCCAAGGC CGATACCTTG GAAATGCAAC ATATGCTGCG CGCAATCAAT GTCTGGCAGC CTGATTTGTA TATCGACGTG CATGTTACCG ATGGCATCGA CTATCAGTAC GATGTCACTT TTGGTTATAA CCTTGCCCAA GGCTTAAGCC CCGCCAGCTA CCGCTGGCTC GAAAACAGCT ACAGACCAGC CATTGAAGCG GCATTAACCG AGCAAGGGCA TATTCCTGGG CAGCTAATTT TTGCTGTGGA TAATGCCGAT ATCACTAAAG GTATGTCACT GTGGAATCCA AGCCCACGCT TTTCAAATGG TTATGGTGAT GCACGCCATT TACCCACCAT TCTGGTTGAA AACCATAGCC TAAAACCCTT TAAGCAACGG GTGTTAGGCA CTTATGTGAT GCTAGAACAA ACCCTAAAAA CCGTTGGTGA ACAAGCGACT AAACTGAAAA GCGCGATTCA GGAAGATAAA TATCGCGCTT CACCGCTGAT CACCCTCACA TGGAAATCAG CACCATTAGA AAAAGGTTGG GATTTTAAAG GCATAGACTA CAAACTTGAG AAAAGCCCTA TTAGTGGCGC CGATGTCGTG CGCTGGACGG GTGAACCTAA ACTCTACCCT AACTTACCTG TGATGGCAGA AACCGTGCCC GATCTTAAGG TCACCCGCCC GAGTGCTTAC TATATCCCTG CCCAGTGGAC ACAGGTCATT GATCGACTGA ACCTACATGG CATTCGCATG ACGGCACTCA AAAAGCCCAC TGAGTTGAAA TTACAGCAAT ACCAACTGAG TCATACAGTG TTTAGTGCTA AGGATTTTGA AGGTCGTCAA ACGGTAAAAG TGGTGTCGGA GTTAACTAAA CTCACCACTG TTTTGCCCGA AGGCACCATT AAAGTCAGCA CAGATCAACC TTTAGGTGAT TTAGCGGTGT TATTGCTAGA ACCCCAATCA CCCGACTCGT TACTGCAATG GGGCTTTTTT AATCCTATCT TTACCCGCAC TGAATATATT GAAGATTATG CGGTAGAGCC ATTGGCAGCA AAAATGCTGA AAGAAGATCC TAAGTTGCAG ACAGAGTTCG ACAAAGCACT GACCAATCCA GAATTTGCCG CCGATCCCGA CGCACGTCTG CGCTGGTTCT ATGAGCGCAG CCCCTACTAC GATAACCAAT ACCTTAAGTA TCCAGTTTAC CGCAGCCGTT AA
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Protein sequence | MGFFMRLFSL SVIAIACLSA NHVSFANEVN TVTPETVVTS APQEVVPLKA IENTQTIETQ KNVAVNTAGA TEGTQPAPIP ERAKTFVNDA ILPPNITWHG ASEALMLSID NEWATPFEQS NGIESPSYDD TILWLDRLAA ETTSLQKVSL GKSPQGRDIW MYIASSEGIS ESASLKQNTK PTILVQAGIH AGEIDGKDAG MMLLRDIVKG NKSDLLEKAN LLFVPIFSVD AHERSGEFNR VNQRGPVNMG WRTTTNNLNL NRDYAKADTL EMQHMLRAIN VWQPDLYIDV HVTDGIDYQY DVTFGYNLAQ GLSPASYRWL ENSYRPAIEA ALTEQGHIPG QLIFAVDNAD ITKGMSLWNP SPRFSNGYGD ARHLPTILVE NHSLKPFKQR VLGTYVMLEQ TLKTVGEQAT KLKSAIQEDK YRASPLITLT WKSAPLEKGW DFKGIDYKLE KSPISGADVV RWTGEPKLYP NLPVMAETVP DLKVTRPSAY YIPAQWTQVI DRLNLHGIRM TALKKPTELK LQQYQLSHTV FSAKDFEGRQ TVKVVSELTK LTTVLPEGTI KVSTDQPLGD LAVLLLEPQS PDSLLQWGFF NPIFTRTEYI EDYAVEPLAA KMLKEDPKLQ TEFDKALTNP EFAADPDARL RWFYERSPYY DNQYLKYPVY RSR
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