| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0134 |
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| Symbol | ribB |
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| ID | 5078960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 154012 |
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| End bp | 154665 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497254 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_001181669 |
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| Protein GI | 146291245 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAGT CTTTACTTGC TCCTTTTGGT ACTGCTATCG AACGTGTTGA AGCCGGTCTT
AATGCCCTGC GTCAAGGCCA AGGTGTGTTA GTTGTCGATG ATGAAGATAG AGAAAACGAA
GGCGACTTAA TTTTCGCTGC CCAGACGCTG ACTAACACTC AAATGGCCAT GCTTATTCGT
GAATGTAGTG GCATCGTTTG TTTGTGTTTA CCGGACGAAA AAGTCAAAGC CCTTGAGTTA
CCGCCTATGG TGGAAAACAA CTCAAGCCAA TATGGTACTG CGTTTACTGT GAGCATTGAG
GCAAAAGTCG GTGTAACGAC TGGCGTTTCT GCTGCTGACC GCGTGACCAC CATCAAAGCG
GCGATTGCCG ATGGCGCTAA GCCAAGTGAT TTGGCGCGTC CTGGCCATGT GTATCCACTG
CGCGCCCAGC CCGGTGGTGT ATTAACTCGC CGTGGTCATA CAGAAGGCAC GATTGATTTA
ATGCAACTCG CGGGTTTAAA GCCCGCTGGC GTATTATGTG AAGTCACTAA TCCAGACGGC
ACAATGGCAC GTTTACCTGA AATTATTGCC TTTGGTGCCC AGCACAATAT ACCTGTGCTA
ACGATTGAAG ATATTGTTCT TTACCGTAAA TCGCTGCTCG CAAATGTAGG CTAA
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| Protein sequence | MNQSLLAPFG TAIERVEAGL NALRQGQGVL VVDDEDRENE GDLIFAAQTL TNTQMAMLIR
ECSGIVCLCL PDEKVKALEL PPMVENNSSQ YGTAFTVSIE AKVGVTTGVS AADRVTTIKA
AIADGAKPSD LARPGHVYPL RAQPGGVLTR RGHTEGTIDL MQLAGLKPAG VLCEVTNPDG
TMARLPEIIA FGAQHNIPVL TIEDIVLYRK SLLANVG
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