Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0122 |
Symbol | |
ID | 5078948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 137763 |
End bp | 138545 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640497242 |
Product | hypothetical protein |
Protein accession | YP_001181657 |
Protein GI | 146291233 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0645812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCATAC TATTTGTGGC TATCAACGCC CATCCTCAGT ACCCCCTCAT CATCTGCGCT AACCGTGATG AGTTTCACCA TAGGCCAACG GCTCCCGCCC ATTATTGGTC ACCAGACCAT AATATTCTGG CAGGTAAAGA TATGCAGGCT GGCGGCACTT GGTTTGGCGT CAATAAACAA GGACAAGTTG CTGGAGTCAC TAATTTACGA GTGCCACAAA AGAGTCCTGA AGCGATGCGT AGTCGTGGAG AACTGATTAC TAAGGCACTC AGCTCTGGTT CACTGATTTG TCCTAATTGG CTTGCCGAGC ATAGTGATAA TTATCAGCCC TTCAACTTGG TTTTTGGGCA AGGTGTACAT CTGTATTGTT TTAACAGCCT AAATAAGCAA ACTATAAAAC TATCCGATGG ATTTCATGCC ATTAGCAATG GAGCACTCGA TGATATTTGG CCCAAAATGG CAAAGGGACA GCAGGCATTA GAAGCATTAA TCAATCAATC GCAAAGTATA GAGATACCCG CTCTACTCCA ACTGATGAAA GATGATTCCC AACCATTGGA TAACGAATTA CCCAACACAG GAATTGGGCT CGAATGGGAG CGACGTTTAG CGGCAATTTA TATTCGCCAT CCCGATTATG GAACGCGCTC CACCAGCGTT TTACTAGAAG ATGTTCAAGG CAGCATGCAT TTCACCGAAG TGAGATACGA TGGCAAAGGT AGGAAACTTG GGCAGCAGGA TTTTCACTTC ATGTTACCCG CCACAACGAA TACAGGCAGT TAG
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Protein sequence | MCILFVAINA HPQYPLIICA NRDEFHHRPT APAHYWSPDH NILAGKDMQA GGTWFGVNKQ GQVAGVTNLR VPQKSPEAMR SRGELITKAL SSGSLICPNW LAEHSDNYQP FNLVFGQGVH LYCFNSLNKQ TIKLSDGFHA ISNGALDDIW PKMAKGQQAL EALINQSQSI EIPALLQLMK DDSQPLDNEL PNTGIGLEWE RRLAAIYIRH PDYGTRSTSV LLEDVQGSMH FTEVRYDGKG RKLGQQDFHF MLPATTNTGS
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