| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0118 |
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| Symbol | |
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| ID | 5078944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 134709 |
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| End bp | 135977 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497238 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001181653 |
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| Protein GI | 146291229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0327583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCAAG AAATAAGGCT CGAAATTTCT AAGTGGCTAG CGGGCTTTGG AATTGATAGC
CAACCCTCTG ATGGAATGTC TACCACCATC ATCATTTTTG CTTGTTTACT CTTGGCGGGA
ATCGCCTATT TCATTGTTCG GCGTGTCGTT ATTCGAGCCG TTAATATGGT GATCCAACGT
TCTAAGGTGA CTTGGGATGA TGTTTTTATG CGTCATAAAG TGCTTGAAAA GCTGGCGATG
GTAGTGCCTG CCATAGTGCT TAATTTATTG ATCCCTATAG CCTTAACGGA ACATCCATTA
TTAAGTGGTC TGGTTGACCG ACTATTGAGT ATTTGGCTAG TGGTACTGAT GATCCGCGCC
ATTTATGCTG CTTTAGATGC GGTTGATGAA ATATCAGATG TGAACCTAGT TGGACGACGT
CTCCCTGTTA AAAGTTTTGT GCAGTTAACT AAGCTGTTTT TGTTCTTTGT TGGGATTATT
GTTTCTATCT CAATCTTGGC TGATCAGTCT CCTGTGTACT TCCTCAGCGG CTTAGGTGTG
GCAACGGGTT TTGTGATGCT GGTGTTTCGC GACACTATTC TAGGTTTTGT GGCGGGCATT
CAGTTGGCGG CAAACCGAAT GGTGAGCAAG GGTGACTGGA TCCAGATGGA CAAGTACGGT
GCCGATGGCG CAGTCGAAGA GGTCTCGTTA ACCACTGTCA AAGTGCGCAA CTGGGACAAA
ACCATCACTA TGATCCCCGC ATACGCGTTA GTCTCGGATG CGTTTCGTAA CTGGCGTGGT
ATGTCTGAGT CGGGTGGCCG TAGGATTAAG CGTGCGGTAA ATATCGATAT CAATAGTATT
AAGTTTTTGA CTGAGGATGA TCGGAATCGC CTCAGTAAAA TCAACTGCTT GAAAGAATAT
TTTCCTGCAA AAATTAATGA AATCCGTGAG TCAAATGCTA AGGTTTCTGA CCTTGATATG
ATAGTGAATG GACGGCATTT AACAAATGTC GGGACTTTCC GTGCTTATTT ACAGGAATAT
TTGCAACGTC ACGATAAAGT GCATAAGGAT ATGACCTTGA TGGTGCGCCA GTTAGCGCCG
ACGACCGAGG GATTGCCTAT TGAGATTTAT ATCTTTACTA ACGATACCCG CTGGGCATTT
TATGAGGCAA TCCAAGCCGA CATATTTGAC CATATTTTTG CGGTATTGCC TGAGTTTGGT
TTGCAGGCCT TCCAAGCGCC GACAGGCAAT GATATCCGCA GTCTAAAATC GGTTAAGGTC
GAGGGTTAG
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| Protein sequence | MDQEIRLEIS KWLAGFGIDS QPSDGMSTTI IIFACLLLAG IAYFIVRRVV IRAVNMVIQR
SKVTWDDVFM RHKVLEKLAM VVPAIVLNLL IPIALTEHPL LSGLVDRLLS IWLVVLMIRA
IYAALDAVDE ISDVNLVGRR LPVKSFVQLT KLFLFFVGII VSISILADQS PVYFLSGLGV
ATGFVMLVFR DTILGFVAGI QLAANRMVSK GDWIQMDKYG ADGAVEEVSL TTVKVRNWDK
TITMIPAYAL VSDAFRNWRG MSESGGRRIK RAVNIDINSI KFLTEDDRNR LSKINCLKEY
FPAKINEIRE SNAKVSDLDM IVNGRHLTNV GTFRAYLQEY LQRHDKVHKD MTLMVRQLAP
TTEGLPIEIY IFTNDTRWAF YEAIQADIFD HIFAVLPEFG LQAFQAPTGN DIRSLKSVKV
EG
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