| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0114 |
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| Symbol | |
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| ID | 5078889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 130468 |
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| End bp | 132579 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640497234 |
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| Product | cytochrome c biogenesis protein, transmembrane region |
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| Protein accession | YP_001181649 |
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| Protein GI | 146291225 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.453155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAG TAAAATCCAT ATTAACCAGA TTCTGGATGC TCGCCTTGAT AGTGACGAGT
CCGTCGCTCA TGGCCGCATC GACGGGCTGG TTGGTTAATG ATAATCACCC GCCAGCCAAA
GTACGTTTTA TGCTGACGGG CGAAGTTGAT CCCGCAACGA ATACTTTGCC CGCTGTGCTT
GAAGTACAAC TTGAGGGTGA TTGGAAAACC TATTGGCGCA GTCCTGGGGA AGGCGGTATC
GCGCCGACGA TAAAATGGGA TGGCTCACAC AATCTACAGC AAGTGGATTG GAGATGGCCA
GCGCCAGAGG AATTCTCATT ATTGGGATTA CAAACCTTTG GTTACAAAGG CAATACCACC
TTTCCATTAA CCATAAAAGT CGATGATATC GCTGCCTCAA CTCAGTTGCG TGGCAAAGTG
ACCTTGTCGA CTTGTACCAC TATCTGTGTA CTGACGGATT ATCAGATGAG TCTCGACTTC
ACGCCCAATG CGTTGCAAGC GGATACCGAT GCCATGTTGG CTTACAACAA GGCTGTGTCG
CTTGTGCCAC AAAAAGTATT GACCCAAGAG GGCCTAAATC CTGCCATGAC AATGGGTTGG
GATGCCGCCA AAGGTCAACT TGAAGTCAGA CTCAATGATG CCAACTGGCA GCAACCCACA
GTGATAATCG ATGGCGATCC AGATACCACA TTCAAGCTAG TGAGCTTAAA GCCAAGCGAA
AGTGAAGCAA ATGGCCAGCA GTTGATTGGT ATTTTTACTG GTCAAAGCTG GTTGGGTGAG
CCTGAAGTTT TGGGTAAATC GCTGAACATG ACTGTCGCCG ATAGCGAGCG GGCGTTGGAA
TACAGCGCCG AAGTTAAGCC TGTGGTGATT ACCCAAGAAG GTACCTCGAT ATTCGGCATG
ATACTGCTGG CGCTTATCGG TGGTTTGATC TTAAACGTTA TGCCCTGCGT GCTACCTGTG
CTTGGCATGA AGCTCAGTTC AGTGGTTGCT GCGCCCGATC TTAAGCGTAA TCAAATCCGC
CAACAGTTCA TCGCATCGGC GCTGGGGATA TTGGCCTCAT TCTGGTTACT CGCTGGTTTT
ATCCTAATGC TTAAGCTCAC GGGTCAAGCG ATTGGCTGGG GTGTGCAGTT CCAAAACCCT
TGGTTTATCG GCTTTATGGC GCTGGTGACC ACAGTGTTTG CATTCAATAT GTTAGGTGTG
TTTGAGATTA ACTTACCCTC TAACGTGCAA ACCAAGCTGG CGACGACGGG CGGCAATAAT
AACAGCGGGC ACTTTTTACA GGGCATGTTT GCGACGCTGC TCGCGACACC GTGCAGCGCG
CCATTTTTGG GTACTGCGGT CGCCTTCGCT TTGGGCGCCG ATGTACTGAG CTTGTTTGCC
GTCTTCACCG CGCTGGCCGT AGGTATGGCG TTCCCTTGGT TAATAGTGGC GGCATTTCCG
CAGGTGGCGG GTTATTTCCC TAAACCCGGC CGCTGGATGA ACACAGTGAA AGTGTTTTTC
TCCGGCATGT TGCTGATCAC CAGTTTATGG CTCATTAGCC TGTTGGCTAG CTTTATTGAT
GTGCTCTACC TCTGGCCGCT AGCGGCTATC ATTGCACTGA TATTTACTGT GTTTATGGCC
CAAAAATACG GTGCTATTGC CCTGGTGAGT TGCTTAGGTG TAGGGGTTGT GCTGTCGGCC
GTTATCGCCT TTATGACGGT GAATCAGTGG GCTAAACCTT TACCTGCGGA CCTTGCTTGG
ACACCATTGA GCCAAGAATC GATCAATCAG CAGGTCGCCC AGGGCAAGAC AGTGTTTGTC
GATGTGACGG CCGATTGGTG TATTACCTGT AAGGCCAATA AAGTTGGCGT GATCTTGCAA
GACCCTGTTT ATAGCCTGTT GCAACAGCCG CATATTGTGC CGATGAAGGG CGATTGGACT
ACGCCTTCTG AGCCCATTAC TCACTACCTG CAAAGCCATA ATCGTTTCGG GGTGCCATTC
AACGTGGTTT ACGGCCCGGG TGCACCGCAG GGGATTGAAT TACCTGAAAT TCTATCAACT
GACCTTGTGC TTGCTGCGAT TGTGCAGGCC TCAGCGTCCC CAGAAAAGTC ATCCGTAGCG
GCAGGGAAAT AA
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| Protein sequence | MSTVKSILTR FWMLALIVTS PSLMAASTGW LVNDNHPPAK VRFMLTGEVD PATNTLPAVL
EVQLEGDWKT YWRSPGEGGI APTIKWDGSH NLQQVDWRWP APEEFSLLGL QTFGYKGNTT
FPLTIKVDDI AASTQLRGKV TLSTCTTICV LTDYQMSLDF TPNALQADTD AMLAYNKAVS
LVPQKVLTQE GLNPAMTMGW DAAKGQLEVR LNDANWQQPT VIIDGDPDTT FKLVSLKPSE
SEANGQQLIG IFTGQSWLGE PEVLGKSLNM TVADSERALE YSAEVKPVVI TQEGTSIFGM
ILLALIGGLI LNVMPCVLPV LGMKLSSVVA APDLKRNQIR QQFIASALGI LASFWLLAGF
ILMLKLTGQA IGWGVQFQNP WFIGFMALVT TVFAFNMLGV FEINLPSNVQ TKLATTGGNN
NSGHFLQGMF ATLLATPCSA PFLGTAVAFA LGADVLSLFA VFTALAVGMA FPWLIVAAFP
QVAGYFPKPG RWMNTVKVFF SGMLLITSLW LISLLASFID VLYLWPLAAI IALIFTVFMA
QKYGAIALVS CLGVGVVLSA VIAFMTVNQW AKPLPADLAW TPLSQESINQ QVAQGKTVFV
DVTADWCITC KANKVGVILQ DPVYSLLQQP HIVPMKGDWT TPSEPITHYL QSHNRFGVPF
NVVYGPGAPQ GIELPEILST DLVLAAIVQA SASPEKSSVA AGK
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