Gene Sputcn32_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0108 
Symbol 
ID5078883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp125794 
End bp126432 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content47% 
IMG OID640497228 
Producthypothetical protein 
Protein accessionYP_001181643 
Protein GI146291219 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGT TAATAAATAA GATGATAAGT AATCGATTGG GTTTCAAATG GTACTGTGCC 
GCAGGCGTGG TGGTTGGCGC GTTAAGTGCA GGAGCAATGG CGGCTAACGC GCCTTCTTTT 
GACTGCACGA AAGTGAATGC TGGCAGTATT GAAGACATGG TCTGTAAGGA TGCGGGGCTG 
AACCAACTCG ATAATCAGTT AGCTAAGGTT TATAGCCAAG CACTTGAAAA ATCAAAGAAT 
GAACAGCCTC CTACTTTAAA AGCGATGCAA CGTGGTTGGG TGAAAGGGCG TAATGAATGC 
TGGAAGAACG ACGATAAACA CGCGTGTATT CAATCTAGCT ATCAAACGCG CATTGCCGAG 
CTACAGGCAC AATATCGTTT AGTTGAAATG ACGGGACCTG TGTCTTATGC CTGTGACGGC 
AGTCCTGCTA ATGAATTGGT CGTGACTTAT TTTAAAACCG AGCCAGCTAC CCTGATTGCC 
GAACGCGGCG ATCAAACCTC GCTGATGTTT GTACAACCCA GTGGTAGTGG TGCTAAATAT 
CAGGGCAGAA ATGAGAGCTT ATGGGAGCAT CAAGGTGAGG CAAAAGTAGT TTGGGGCTAC 
GACACGCCGG AAATGACCTG TAAACTGGTA ACCAAATAG
 
Protein sequence
MAKLINKMIS NRLGFKWYCA AGVVVGALSA GAMAANAPSF DCTKVNAGSI EDMVCKDAGL 
NQLDNQLAKV YSQALEKSKN EQPPTLKAMQ RGWVKGRNEC WKNDDKHACI QSSYQTRIAE 
LQAQYRLVEM TGPVSYACDG SPANELVVTY FKTEPATLIA ERGDQTSLMF VQPSGSGAKY 
QGRNESLWEH QGEAKVVWGY DTPEMTCKLV TK