| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0099 |
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| Symbol | |
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| ID | 5078874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 111971 |
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| End bp | 114235 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640497219 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001181634 |
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| Protein GI | 146291210 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTCAAT GGCTTAAAGG TTTTTTATTT ATCAGGGAGC AAGATTTCTT AAATCCTGAT
AGAGAATTAT TAAAAACCAG CTTACTACGG ATTATTTTGC TCAGTGGTGC CATCTTAACC
ACCAGCATTG TGCTGCACAG TTCTTTAATG GCCTATCAGC TAAATCTTAG CTTTGTCATT
ATTATCACCG TCAGCTTTTT GAGTGTGCTG ATCTCTGCTT TGTGGTTCAC CCGCCGATAT
TTGATGCTCA GTTCAATCAG CCTGTTGGCT ATGGTTGTCG CAGCCTGCAT ATGCATCTTG
TTGTTTGTTC CTGATTTTAA TTTGTCGCAA GCAGGCATTA TTTTTTTATA TACCCTACCT
CTGATGGCAC TTTTTCTCTT TGGGGCAAAA GCTGCCATCA TAATGATGTT TTTCAATGTA
TTACCCTTTT TACTGCTACT GCAAAATCGT AACCTCCCGA CGATTATCGA TATTGATATC
AGTATGCCTG CAACCCATGC CTACCTAAAT GGCTTGCTGT TTACGTTTTT TAATATCTGT
ATTCCTTTGT CGGCAATGCG GCTATTAAAA ACTCAAAAAA TTCATTCGCA GCAGATGATT
AAGCACCATG AGGCACTGCA ACACACACTA GAGCAATACA CTGAAATATT TGAAAATAAT
GGCACGGCCT CTTTCTTTTG TAATGAAGAT GGGCTGATTC TCAACCTAAA TGATGCAGCA
AAAAATATCG CCAACGATGT CAGGGTAAAC CAGACTCGAC TATCTGATAT TTTTGAACTG
GCGGAAGATA CTCCCATCAA TTTGTTTGCA GCATCTTTCC CTACACATTT AAAAAACAAC
CCTAAAGCCA AATACTTACT ACAAAAAGCC TCATTACAGC ATCACGATAC TTTACTGTTT
CACTGCCATG ATGTTACCGA ACAGGCAAAT CATGCAATTG AATTAAGCCG ACTTAAAAAA
CACCATATCA GCACACATTT TTATGACTTA GTCACCAGTC TGCCAAACGA AAATCATTGG
TATAACCCTG CGCCGAGTGT TATCCATCAA AAAATGACTG TTGCGATTGT CAAAATTGAT
AACCTTAGCC AAATTAATGC CGCGTTCGGC ATTCAAATAG GAGATGCCCT GCTCAAAATC
TTTGCAAATG AGCTAAAACA GCGTTTTGGC CAACATGCAA AAATATACCG CTTTAGGGGA
GCCTCCTTCG CGCTTGAATT TACCAGTTTG CCGCTCATTT CCCCTGAAAA TCTCGCTCAA
CAATTGCGTG AACGTATTCC GACCAACTTA CAACTTAAAC AAAAACGACA AGTTGAATAC
CATCTCGAAT GCCGTGTTGG TTGCAGTTCA GGCACAAAAG CCTCACCACA GCAAGCTGCA
GAACAATGCT TAATTGCTAT AAAACAAACG ACTCAAGCAA GCCCTGTGAT GGTGTATTAC
ATCGGCCTTA TCAATAATTT ACTCGAAGCA TCATCACAAA AAGCAAGGAT CCGAGACGCC
CTAAAATACA ACCGCCTCGA AATGTGGCTA CAACCTCAGG TGATGGCTAA CGGCCATATT
ATAAGTTTTG AAGCTCTTGC CAGAATGTTC GACGAAGATG GCACAATGAT AATGCCCAAT
ACATTTATCC CCATTATTGA GTCATCCCAA CTACAGGCTA TCTTTGCCAT AAAAGTGTTC
CGACAATTAC TACAGTTGAT CCGTTCTTGG CCTAAAAATG TGCCGCCGGT GAAGATTGCT
TTCAACCTAT CAGGACAGGA TATTCTGTCG GATCGATTCT TTAAGGTGCT GATACAGACC
TATATGAATC ACCCTGAGCT TATCCCATTA TTAGAAATTG AAATCACCGA AACATCAGTG
TTTTCAACCT ATAAAGAAAC TGGGCGCCGT CTTAACACCC TTGCACGAAT GGGTGTATCT
ATCGCAATTG ATGATTTTGG TACTGGGCAT GCGTCATTGA GCCAACTTAT CGATATCAGC
GCAGATACGA TTAAAATCGA TCGCTACTTT ATCAGCCAAC TTGGGATTAG CGAGCGCCAT
ACCCAAATTG TGAATGCGGC TATCCTATTA GCAAAGAGTT TAAAATTGAA CGTCATTGCC
GAGGGGATTG AAACTGAGGC CCAACTGTCG CAACTCACCG CTTTAGGCTG TAAGCAATTT
CAAGGTTATT TATTTGGAAA ACCCGCCCCA GCCAATCTTT GGCTGAAAAC CTTTCAAATG
CAAACTCCCA TGCACTGGTT CCCTGATAAA AAAAGTGCCA ACTAA
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| Protein sequence | MFQWLKGFLF IREQDFLNPD RELLKTSLLR IILLSGAILT TSIVLHSSLM AYQLNLSFVI
IITVSFLSVL ISALWFTRRY LMLSSISLLA MVVAACICIL LFVPDFNLSQ AGIIFLYTLP
LMALFLFGAK AAIIMMFFNV LPFLLLLQNR NLPTIIDIDI SMPATHAYLN GLLFTFFNIC
IPLSAMRLLK TQKIHSQQMI KHHEALQHTL EQYTEIFENN GTASFFCNED GLILNLNDAA
KNIANDVRVN QTRLSDIFEL AEDTPINLFA ASFPTHLKNN PKAKYLLQKA SLQHHDTLLF
HCHDVTEQAN HAIELSRLKK HHISTHFYDL VTSLPNENHW YNPAPSVIHQ KMTVAIVKID
NLSQINAAFG IQIGDALLKI FANELKQRFG QHAKIYRFRG ASFALEFTSL PLISPENLAQ
QLRERIPTNL QLKQKRQVEY HLECRVGCSS GTKASPQQAA EQCLIAIKQT TQASPVMVYY
IGLINNLLEA SSQKARIRDA LKYNRLEMWL QPQVMANGHI ISFEALARMF DEDGTMIMPN
TFIPIIESSQ LQAIFAIKVF RQLLQLIRSW PKNVPPVKIA FNLSGQDILS DRFFKVLIQT
YMNHPELIPL LEIEITETSV FSTYKETGRR LNTLARMGVS IAIDDFGTGH ASLSQLIDIS
ADTIKIDRYF ISQLGISERH TQIVNAAILL AKSLKLNVIA EGIETEAQLS QLTALGCKQF
QGYLFGKPAP ANLWLKTFQM QTPMHWFPDK KSAN
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