| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0096 |
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| Symbol | |
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| ID | 5078871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 109915 |
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| End bp | 110664 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640497216 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001181631 |
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| Protein GI | 146291207 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAGGC TCTTGATGCA CCGTACTGAT ATACAGTTAT CGGCATTGTT TAAATGGCCT
AGTAACTTAT GGTTGTTAGG AATATGCCTG TTGCTGCTTT CGAGTGCAGT GATGGCGAAT
AATGCACAGG ATGCCCATTC AAAACCTCGA ATCGTGGCAC GTTATTCTGA GACGGGAATC
CTCAGCCGCG AAGGGCAAGA GAAGTTTAAA GTATATCAAT ATCAACAAGC TAATGGTGTT
ACTGTATTTT CCGATAAGGC ACCCAGTAAT AACCAATACC AAATTTTATT GTACGAGTGT
TTTGCCTGCC GCCCGGACTC GAACATTGAT TGGAATGCCA TTCGTTTATT TAGCGCAAAT
TATGATGCAT TAATCGCTCA AGCCGCCCAT AAACATCAGT TAGAACCTGC GTTAATTCGC
GCCGTGATCC ATGCTGAATC GGCTTTTAAT TCCCGCGCGG TATCACGTAG TGGCGCTATG
GGATTAATGC AATTAATGCC AGAAACAGCG AAAGAAATGG GCGTTATAAA TGCATTTTTG
CCTGAAGAAA ATATTTTGGG TGGCAGTAAA TATTTAGCAC AAATGCTAAA GCAATTTAAT
GGCGATATTG CCTTAGCCTG TGCAGCCTAT AATGCGGGAC CAACAACTGT GACACAGTAT
AATGGCATTC CGCCCTATCC TGAGACTCAA GCCTATGTTG AGCGGGTACA AATTTTATTG
AAGCGCTATC GTGAACAAAA CCGAGCCTAG
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| Protein sequence | MYRLLMHRTD IQLSALFKWP SNLWLLGICL LLLSSAVMAN NAQDAHSKPR IVARYSETGI
LSREGQEKFK VYQYQQANGV TVFSDKAPSN NQYQILLYEC FACRPDSNID WNAIRLFSAN
YDALIAQAAH KHQLEPALIR AVIHAESAFN SRAVSRSGAM GLMQLMPETA KEMGVINAFL
PEENILGGSK YLAQMLKQFN GDIALACAAY NAGPTTVTQY NGIPPYPETQ AYVERVQILL
KRYREQNRA
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