Gene Sputcn32_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0088 
Symbol 
ID5078863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp100033 
End bp100563 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID640497208 
Producthypothetical protein 
Protein accessionYP_001181623 
Protein GI146291199 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTGT ATTTTCGTTT GTTTTGGTTG TTATTTTGGC GTACGCGCCA TTGTCGTAAG 
ATCGATTTTC TAGGCACAAG TCGTATCACT TATCGTGCTT TACCGAGCGA TTGTGACATC 
AATTTCCATC TGACTAACTC CCGCTATCCC GCATTTATGG ATCTGGCGCG GACCTATATG 
CTCGCCGAGA TGGGTCTACT GAAACGCTTC TTAAAGTTGA AGTGGATGCC GATAGTCAAC 
GCCGCCGAAT TTACCTATAT TCGCGATATC AAGCCGCTAA AAACCTTTGA AATTGAAACC 
AAAGTTGTTG GTTGGGATGA AAAGTATTTT TATATCGAAC AGCGCTTTGT GAGCGAACGT 
GGCCTGCATT GTATCGTGCA TGTACGCGGC GTGTTTGTGT GCAAAGGTAA GCAGGTGCCG 
CTCGATGTAT TAGTGAAAGA GGCGGGTTAT ACCGATCCTG CACCTGAGTT GCCGCCAGAA 
GTGGTGAAGT GGAAAGCGTT TTTGCAGTTA AAAAAAGAAC GTAATATGTG A
 
Protein sequence
MNLYFRLFWL LFWRTRHCRK IDFLGTSRIT YRALPSDCDI NFHLTNSRYP AFMDLARTYM 
LAEMGLLKRF LKLKWMPIVN AAEFTYIRDI KPLKTFEIET KVVGWDEKYF YIEQRFVSER 
GLHCIVHVRG VFVCKGKQVP LDVLVKEAGY TDPAPELPPE VVKWKAFLQL KKERNM