| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0083 |
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| Symbol | |
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| ID | 5078858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 92446 |
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| End bp | 93942 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497203 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001181618 |
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| Protein GI | 146291194 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCCC TCTCTTACGT GTCCTTAGGT ATTTATTTTA TTGCCATGCT CGCTATTGGT
TTATTTGCCT ACCGTAAATC CACCAGCGAT GTGTCAGGCT ATATTTTAGG TGGCCGTAAA
GTGAGTCCGC AGGTCACTGC ACTCTCGGCT GGCGCATCGG ACATGAGCGG CTGGATGCTT
ATGGGTCTTC CGGGTGCAAT GTTTCTAGTG GGTTTTGAAA CCATTTACAT CGCCCTCGGA
TTATTGATTG GTGCTCTAAT CAATTATTTG GTGGTGGCGC CTAAATTGCG GGTTTACACT
GAAGTCGCAA ATAATGCCCT TACGATTCCT GAGTTTTTTG CGAAACGCTT TGGTAATGCA
AACAGTAGTA TCCGTATTAT TGCCGCAGTG ATCATAGTGA TCTTTTTTAC CTTATACACC
TCCGCAGGGT TAGTGGCGGG AGGTAAGTTA TTTGAATCAG CTTTCGGCCT AAATTATAAC
ATTGGCCTAG TCGTCACACT CAGCGTAGTA GTTTCTTATA CTCTGCTTGG GGGCTTTTTA
GCCGTAAGCC TGACCGACTT TGTGCAAGGC TGCATTATGT TTGTTGCCTT AGTCTTAGTG
CCTGTAGTTG CTTATCAAGA ATTTACCAGC GCCGATAGGA TGATGAACTT TGCCTATCAG
TCAATTCCGC ATTTTAGCGA TGCAATGCAA AACGTCACCT TCCTAGGGCT TATATCAAGC
CTATCCTGGG GGTTAGGTTA TTTCGGCCAA CCACATATTA TCGTGCGCTT TATGGCGATA
CGTTCAGTGG CGGATATTAA AATGGCAAGA CGCATAGGTA TCAGTTGGAT GACAGTCACC
ATTGTTGGTG CTCTGGCGAC GGGACTGGTC GGCATTGCTT ATGCCAATAA ATTTGGCATG
AAACTTAACG ATCCCGAAAC CATCTTTATT GTGTTCTCTG AATTATTATT CCATCCCCTG
ATCAGTGGCT TCCTATTGGC GGCTATTCTT GCTGCGATTA TGAGCACGAT TTCATCGCAG
TTATTGGTGT CATCGAGTTC GCTGACAGAA GATATTTATC AGGTGGTATC GAAAAAAGAG
TCAAGCGAAA AAGACATGGT GAAAATGGGC CGTTACGGCG TGGCTGGTGT GGGTATTGTG
GCAACACTTT TAGCGCTTGA TCGCTCTAAC AGTATTCTTT CGCTGGTCAG TAATGCTTGG
GCAGGATTCG GCGCTGCCTT TGGTCCACTC GTGTTATTTA GCTTATATAA AGCGAACCTA
ACCCATAAAG CGGCCATTGC GGGAATCGTT TCAGGTGCAC TTACAGTACT ATTTTGGATT
TACGCCCCCG TGCTTGCCGA TGGTAAAGCA TTAACTAGCA TAGTGTATGA AATGATCCCC
GGATTTATCG TCAGTAGCGC GGTCATTTGG CTAGTGAGCT TTCTTGATAC TGAACCTAGT
GCAAAAACCA CTAAGATGTT CCACAAGGCG GGCCGTGTTT TAGCCGAAGA AGGATAA
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| Protein sequence | MNSLSYVSLG IYFIAMLAIG LFAYRKSTSD VSGYILGGRK VSPQVTALSA GASDMSGWML
MGLPGAMFLV GFETIYIALG LLIGALINYL VVAPKLRVYT EVANNALTIP EFFAKRFGNA
NSSIRIIAAV IIVIFFTLYT SAGLVAGGKL FESAFGLNYN IGLVVTLSVV VSYTLLGGFL
AVSLTDFVQG CIMFVALVLV PVVAYQEFTS ADRMMNFAYQ SIPHFSDAMQ NVTFLGLISS
LSWGLGYFGQ PHIIVRFMAI RSVADIKMAR RIGISWMTVT IVGALATGLV GIAYANKFGM
KLNDPETIFI VFSELLFHPL ISGFLLAAIL AAIMSTISSQ LLVSSSSLTE DIYQVVSKKE
SSEKDMVKMG RYGVAGVGIV ATLLALDRSN SILSLVSNAW AGFGAAFGPL VLFSLYKANL
THKAAIAGIV SGALTVLFWI YAPVLADGKA LTSIVYEMIP GFIVSSAVIW LVSFLDTEPS
AKTTKMFHKA GRVLAEEG
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