Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0079 |
Symbol | |
ID | 5078854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 86685 |
End bp | 88352 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640497199 |
Product | urocanate hydratase |
Protein accession | YP_001181614 |
Protein GI | 146291190 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2987] Urocanate hydratase |
TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGC GCCACGACCC AAGCCGCCGT ATTATTGCAC CGCATGGCAC ACAATTAAGC TGTAAGAGTT GGCTCACAGA AGCGCCAATG CGCATGTTAA TGAACAACTT ACATCCCGAT GTCGCCGAGC GCCCAGAAGA CTTAGTGGTC TACGGCGGTA TCGGCCGCGC CGCCCGCGAT TGGGACTGTT ACGACAAAAT CATCGAAGTC CTACAGCGCC TCGAAGACGA CGAAACCTTA TTAGTGCAAT CGGGCAAACC TGTGGGCGTA TTTCGCACCC ATGCGGATGC GCCGCGCGTG CTGATTGCTA ACTCAAACCT AGTGCCACAT TGGGCGAACT GGGAGCATTT CAACGAGTTA GACAAGTTAG GTTTGGCCAT GTACGGCCAG ATGACGGCCG GTTCTTGGAT CTATATCGGC ACTCAAGGCA TAGTCCAAGG CACTTACGAG ACCTTTGTGT CGGTCGCAAA ACAGCACTTT GAGGGTATCT CTAAAGGCAA ATGGATCCTC ACCGGCGGGT TAGGCGGCAT GGGCGGCGCA CAAACGCTGG CAGGCACTAT GGCTGGCTTC TCGGTGTTAG CCTGTGAAGT CGACGAAACC CGCATTGATT TCCGTTTGCG TACTCGCTAT GTTGACAAAA AAGCCACTTC GCTCGATGAA GCATTAGCCA TGATTGAAGC AGCGAACCAA GCTGGCAAGC CAGTATCAGT GGGCTTATTA GCTAACGCCG CCGATGTGTT TGCTGAATTA GTTAAACGTG GCGTTACTCC TGATGTGGTG ACCGACCAAA CCTCGGCACA CGATCCATTA AACGGTTATC TGCCGCAGGG CTGGACTATG GCTGAGGCTG CGGCCATGCG TAAAACCGAC GAAGCTGCTG TGATTAAGGC GGCGAAAGCC TCGATGGCGG TGCAAGTACA AGCCATGCTC GACCTGCAAA CCGCGGGTGC AGCCACGCTC GATTACGGTA ACAACATTCG CCAAATGGCG TTTGAAATGG GCGTTGAAAA TGCCTTCGAT TTCCCTGGTT TTGTACCTGC TTATATTCGC CCACTGTTCT GTGAAGGCAT TGGCCCGTTC CGCTGGGTGG CGTTATCTGG CGATCCCGAA GATATCTACA AAACCGACGC TAAAGTCAAA GAACTGATCC CAGATAATCC ACTCCTACAC AATTGGTTAG ACATGGCGCG CGAGCGTATC GCCTTCCAAG GTCTGCCAGC GCGTATTTGC TGGGTTGGCT TAAAAGATCG CGCCCGCTTG GCGTTAGCTT TCAACGAAAT GGTCAAAAAT GGCGAGTTGT CGGCGCCCGT GGTGATTGGT CGCGACCACT TAGATTCTGG CTCAGTGGCC AGCCCGAACC GCGAAACCGA ATCTATGCTG GACGGCTCAG ATGCGGTATC CGATTGGCCA TTATTGAATG CACTACTCAA CACCGCCAGC GGCGCAACTT GGGTATCTTT ACACCACGGC GGCGGCGTCG GTATGGGCTT TAGCCAACAT TCGGGTGTGG TCATTGTGTG CGACGGCACA GATGCGGCGG CAAAACGGGT TGGCCGTGTG CTGTGGAACG ACCCTGCGAC AGGCGTGATG CGCCATGCCG ATGCGGGCTA CGAGATTGCG AAAAACTGCG CCAAGGAGCA GGGCCTCGAT TTACCTATGC AAGACTAG
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Protein sequence | MDKRHDPSRR IIAPHGTQLS CKSWLTEAPM RMLMNNLHPD VAERPEDLVV YGGIGRAARD WDCYDKIIEV LQRLEDDETL LVQSGKPVGV FRTHADAPRV LIANSNLVPH WANWEHFNEL DKLGLAMYGQ MTAGSWIYIG TQGIVQGTYE TFVSVAKQHF EGISKGKWIL TGGLGGMGGA QTLAGTMAGF SVLACEVDET RIDFRLRTRY VDKKATSLDE ALAMIEAANQ AGKPVSVGLL ANAADVFAEL VKRGVTPDVV TDQTSAHDPL NGYLPQGWTM AEAAAMRKTD EAAVIKAAKA SMAVQVQAML DLQTAGAATL DYGNNIRQMA FEMGVENAFD FPGFVPAYIR PLFCEGIGPF RWVALSGDPE DIYKTDAKVK ELIPDNPLLH NWLDMARERI AFQGLPARIC WVGLKDRARL ALAFNEMVKN GELSAPVVIG RDHLDSGSVA SPNRETESML DGSDAVSDWP LLNALLNTAS GATWVSLHHG GGVGMGFSQH SGVVIVCDGT DAAAKRVGRV LWNDPATGVM RHADAGYEIA KNCAKEQGLD LPMQD
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