Gene Sputcn32_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0079 
Symbol 
ID5078854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp86685 
End bp88352 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content54% 
IMG OID640497199 
Producturocanate hydratase 
Protein accessionYP_001181614 
Protein GI146291190 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGC GCCACGACCC AAGCCGCCGT ATTATTGCAC CGCATGGCAC ACAATTAAGC 
TGTAAGAGTT GGCTCACAGA AGCGCCAATG CGCATGTTAA TGAACAACTT ACATCCCGAT
GTCGCCGAGC GCCCAGAAGA CTTAGTGGTC TACGGCGGTA TCGGCCGCGC CGCCCGCGAT
TGGGACTGTT ACGACAAAAT CATCGAAGTC CTACAGCGCC TCGAAGACGA CGAAACCTTA
TTAGTGCAAT CGGGCAAACC TGTGGGCGTA TTTCGCACCC ATGCGGATGC GCCGCGCGTG
CTGATTGCTA ACTCAAACCT AGTGCCACAT TGGGCGAACT GGGAGCATTT CAACGAGTTA
GACAAGTTAG GTTTGGCCAT GTACGGCCAG ATGACGGCCG GTTCTTGGAT CTATATCGGC
ACTCAAGGCA TAGTCCAAGG CACTTACGAG ACCTTTGTGT CGGTCGCAAA ACAGCACTTT
GAGGGTATCT CTAAAGGCAA ATGGATCCTC ACCGGCGGGT TAGGCGGCAT GGGCGGCGCA
CAAACGCTGG CAGGCACTAT GGCTGGCTTC TCGGTGTTAG CCTGTGAAGT CGACGAAACC
CGCATTGATT TCCGTTTGCG TACTCGCTAT GTTGACAAAA AAGCCACTTC GCTCGATGAA
GCATTAGCCA TGATTGAAGC AGCGAACCAA GCTGGCAAGC CAGTATCAGT GGGCTTATTA
GCTAACGCCG CCGATGTGTT TGCTGAATTA GTTAAACGTG GCGTTACTCC TGATGTGGTG
ACCGACCAAA CCTCGGCACA CGATCCATTA AACGGTTATC TGCCGCAGGG CTGGACTATG
GCTGAGGCTG CGGCCATGCG TAAAACCGAC GAAGCTGCTG TGATTAAGGC GGCGAAAGCC
TCGATGGCGG TGCAAGTACA AGCCATGCTC GACCTGCAAA CCGCGGGTGC AGCCACGCTC
GATTACGGTA ACAACATTCG CCAAATGGCG TTTGAAATGG GCGTTGAAAA TGCCTTCGAT
TTCCCTGGTT TTGTACCTGC TTATATTCGC CCACTGTTCT GTGAAGGCAT TGGCCCGTTC
CGCTGGGTGG CGTTATCTGG CGATCCCGAA GATATCTACA AAACCGACGC TAAAGTCAAA
GAACTGATCC CAGATAATCC ACTCCTACAC AATTGGTTAG ACATGGCGCG CGAGCGTATC
GCCTTCCAAG GTCTGCCAGC GCGTATTTGC TGGGTTGGCT TAAAAGATCG CGCCCGCTTG
GCGTTAGCTT TCAACGAAAT GGTCAAAAAT GGCGAGTTGT CGGCGCCCGT GGTGATTGGT
CGCGACCACT TAGATTCTGG CTCAGTGGCC AGCCCGAACC GCGAAACCGA ATCTATGCTG
GACGGCTCAG ATGCGGTATC CGATTGGCCA TTATTGAATG CACTACTCAA CACCGCCAGC
GGCGCAACTT GGGTATCTTT ACACCACGGC GGCGGCGTCG GTATGGGCTT TAGCCAACAT
TCGGGTGTGG TCATTGTGTG CGACGGCACA GATGCGGCGG CAAAACGGGT TGGCCGTGTG
CTGTGGAACG ACCCTGCGAC AGGCGTGATG CGCCATGCCG ATGCGGGCTA CGAGATTGCG
AAAAACTGCG CCAAGGAGCA GGGCCTCGAT TTACCTATGC AAGACTAG
 
Protein sequence
MDKRHDPSRR IIAPHGTQLS CKSWLTEAPM RMLMNNLHPD VAERPEDLVV YGGIGRAARD 
WDCYDKIIEV LQRLEDDETL LVQSGKPVGV FRTHADAPRV LIANSNLVPH WANWEHFNEL
DKLGLAMYGQ MTAGSWIYIG TQGIVQGTYE TFVSVAKQHF EGISKGKWIL TGGLGGMGGA
QTLAGTMAGF SVLACEVDET RIDFRLRTRY VDKKATSLDE ALAMIEAANQ AGKPVSVGLL
ANAADVFAEL VKRGVTPDVV TDQTSAHDPL NGYLPQGWTM AEAAAMRKTD EAAVIKAAKA
SMAVQVQAML DLQTAGAATL DYGNNIRQMA FEMGVENAFD FPGFVPAYIR PLFCEGIGPF
RWVALSGDPE DIYKTDAKVK ELIPDNPLLH NWLDMARERI AFQGLPARIC WVGLKDRARL
ALAFNEMVKN GELSAPVVIG RDHLDSGSVA SPNRETESML DGSDAVSDWP LLNALLNTAS
GATWVSLHHG GGVGMGFSQH SGVVIVCDGT DAAAKRVGRV LWNDPATGVM RHADAGYEIA
KNCAKEQGLD LPMQD