| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0078 |
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| Symbol | |
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| ID | 5078853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 85836 |
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| End bp | 86543 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640497198 |
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| Product | histidine utilization repressor |
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| Protein accession | YP_001181613 |
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| Protein GI | 146291189 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTACTC CTAAGTTTGC AGAAATTAAG CAATACATTA TCTCCTCTAT CGAGTCGGGT
GAGTGGGAAG AGCATGCTCG CGTGCCTTCT GAGAATCAGC TTGCCGATTT GTTTACCTGC
AGCCGAATGA CGGCGCGACG TGCGCTAACC GAGCTGACTG ATAGCGGTGT GCTTGAGCGT
TCTCAAGGGT TAGGCACCTT TGTCGCTGGG TGTAAATCCC AGTCGTCTAT GTTGGCGATC
CGCAATATTG CCGATGAGAT AAAAGACCGC GGCCACGGCT ATAGCGTGCA GCAATGGGTG
TTAGAGCAAG TCGCGGCGAG TCAGAGTATC GCAATTTCCC TTGGGCTTGA GCACGGTGCG
GCAGTCTTCC ATTCGATCTT AGTGCATTGC GAGCAGGGCT TACCGTTGCA AGTCGAGGAG
CGTTATGTGA ATCCCGAGTT GGTGCCCGAT TATTTATTGC AGGATTTTAC CCAGCAGACA
CCCCACGAAT ATTTGTCCCA AGTGGCACCG CTGACCGAGG CGCATCACAC GATTGAAGCG
ATTATCGCCA GTGAAGAATT ACAGCAAAGG CTCGAAATCC CCGCCACTGA GCCCTGTTTA
CAGATTTTAC GACGCACTTG GTCACGCCAA GGCGTCGTGA GTTTCGCAAA ATTAGTTCAT
CCAGGTAGCC GTTTTAAACT CGGCGGCCAC TTAACCTTTA GCAAGTAA
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| Protein sequence | MATPKFAEIK QYIISSIESG EWEEHARVPS ENQLADLFTC SRMTARRALT ELTDSGVLER
SQGLGTFVAG CKSQSSMLAI RNIADEIKDR GHGYSVQQWV LEQVAASQSI AISLGLEHGA
AVFHSILVHC EQGLPLQVEE RYVNPELVPD YLLQDFTQQT PHEYLSQVAP LTEAHHTIEA
IIASEELQQR LEIPATEPCL QILRRTWSRQ GVVSFAKLVH PGSRFKLGGH LTFSK
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