| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0055 |
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| Symbol | |
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| ID | 5078782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 62906 |
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| End bp | 64045 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497175 |
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| Product | transport protein, putative |
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| Protein accession | YP_001181590 |
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| Protein GI | 146291166 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TAATCGCTAT GGTTCGTAAG GAACTTATCG ATGCCGCTCG CGATAAGCGT
TCTGTGATGG CGGGACTTTA TTACGCCATT GGCACACCGC TGATCATGTG TGGCCTGTTT
ATGGTGTTAA TTGGCCAATT AACCAGCCCT GATGATCTTA AAATCACTAT CACCAATCCA
GATAACGCCC CTGATTTAGT CCGCTTTTTA TCAAATAAAG GTATTAGCAG CGGTGAAGTG
AAGGACAGTG AACTTAAAGC CATAGAGCTT ATCATCAGCA CCGACTATGC CGAGCAAATG
AATCAAGGCA AAGCCGCCGA AATTACTATC GTGGCCGATA ATTCGGAGGA AAAATTACAG
AACTCCATTC GCCGCTTAGA GAAACAATTA CAAGCCTACA GCGCCGAAAT GGGTAGCCTA
CGTTTAATCG CGCGCGGTAT CGACCCGCGT GTGGTACAGC CACTAAAAGT GAATGTGCAA
GATCAAGCCA CACCTGATTC TAAAGGCGGG ATGATCTTAG GTATCGCTAT TTTTACTATG
ATTTACTCGG TATTTATCTC GGGGATGAAC CTTGCCATAG ATACCAGCGC AGGGGAACGT
GAGCGTAACT CTCTGGCTTT GTTACTTAGC CATCCACTGA CCACGCGCCA ATTAGTGCTC
TCTAAGATCA TCGCTGTTGG CCTATTTGCC CTGCTCGGTT TAGTGCTGAT CTTGCTGGTG
TCTAAAATCG CCTACACCTT TGTGCCATGG CAGGAATTAG GCTTTAGCGT CAATATCACC
AGCGAATTTA TCGCCTTAAT GTTAATCGTC GGCATCCCCG TCGCTTTGAT GGCCGCATGC
CTGCAATTGT TCGTGTCTTT TATGGCAAAA ACCTTTAAAG AAGCCCAGTC CTATCTCACT
ATAGTGCTAT TTGTGCCCTT AGCATTATCA ATGGCCGCCA GCTACAACAT AGCGCCAGAT
ATGCTGCAAT GGTTGCCCGT CTCTGGCCAG CAACAAGCAT TGATGGACTT TATCAAAGGT
AAAGACTTGC CCATGCTGCA ATTACTGGTG TCGACCTTAG GCACCCTCGC CATTGCGATA
TTACTCGCCT TTGGTATGGA AAGATCGCTC AAGAGTGAAA AGGTCATCTT CGGTTTGTAA
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| Protein sequence | MNKIIAMVRK ELIDAARDKR SVMAGLYYAI GTPLIMCGLF MVLIGQLTSP DDLKITITNP
DNAPDLVRFL SNKGISSGEV KDSELKAIEL IISTDYAEQM NQGKAAEITI VADNSEEKLQ
NSIRRLEKQL QAYSAEMGSL RLIARGIDPR VVQPLKVNVQ DQATPDSKGG MILGIAIFTM
IYSVFISGMN LAIDTSAGER ERNSLALLLS HPLTTRQLVL SKIIAVGLFA LLGLVLILLV
SKIAYTFVPW QELGFSVNIT SEFIALMLIV GIPVALMAAC LQLFVSFMAK TFKEAQSYLT
IVLFVPLALS MAASYNIAPD MLQWLPVSGQ QQALMDFIKG KDLPMLQLLV STLGTLAIAI
LLAFGMERSL KSEKVIFGL
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