| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0044 |
|---|
| Symbol | |
|---|
| ID | 5078771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 52525 |
|---|
| End bp | 53709 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640497164 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001181579 |
|---|
| Protein GI | 146291155 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACATC ATGATGTGAT TATTATCGGA GCCGGCGCCG CAGGATTAAT GTGTGCTGCA
ACAGCGGGTT ACCGAGGCCG TGATGTACTC GTACTCGATA ACGCCAAGCA AGCGGGGCGT
AAAATCCTCA TTAGCGGTGG CGGCCGTTGT AACTTCACTA ACCTTAAAGT TGAGCCCGCT
AACTTTATCT GTAGCAATCC GCACTTTGTA AAATCGGCAC TTGCGCGTTA TCCCTCACAG
CAGTTTATCG AACTGGTTGA GCGCCACGGC ATTGAATACC ACGAGCGCGA TCATGGCCAG
CTATTCTGTA ATGACTCGGC CAAAGAAATT GTCACTATGC TGCTGACTGA ATGCGAATGG
GCTGGTGTGA GTATAAAGCT GCGCACCGAT ATTCTGGCCG TTAAAAAGAC CGAAGTTGGG
CGCTTTGAGC TTAACACTTC TAATGGCGAG TTAAGTTGCG ATTCATTGGT GGTTGCTACT
GGCGGCTTAT CTATGCCCAA ACTCGGCGCC ACGCCTTATG GTTATCAACT GGCCGAGCAA
TTTGGCCTCA AAGTATTACC AACCCACGCA GGGCTAGTAC CTTTTACCTG GCACAGTGAA
GATAAAATTC GTTTCGAGCC CTTATCGGGC ATAGCCGTAC CTAGCCGCAT TACCGCCAAA
GACGGCACTA GCTTTAGTGA AGCTCTGCTA TTCACCCATC GCGGCTTATC TGGCCCCGCG
ATTTTGCAGA TTTCCAACTA TTGGAAAGCG GGCGAAACCA TAGAAATCAA TCTATTACCC
AATATGGATT TGGCGCAGAC GCTAGAGCAA CAATTGGCTG CACATCCAAA GCAGAGTCTG
CGTAATACCT TAAGCCAGTG GTTACCTAAG CGGCTGGTGG AAGTATTATT CGATGAGGCG
TTATTAAACA AAGCGTTAAA TCAGCTTGTG CATGCAGAGC GCGCTAAGCT GGTCGACGAT
CTGCACCGCT GGACAGTATT AATGAATGGC ACCGAAGGCT ACCGCACCGC CGAAGTGACG
TTAGGCGGTG TGGATACCCA TGAACTATCC TCCAAAACCA TGGAAGCTAG CAAAGTGCCT
GGACTCTACT TTATCGGTGA AGTGATGGAT GTAAGTGGTT GGTTAGGTGG GTTTAATTTC
CAATGGTCTT GGGCCTCCGG CGTCGCAGCA GGGCAAGTAG TGTAA
|
|---|
| Protein sequence | MKHHDVIIIG AGAAGLMCAA TAGYRGRDVL VLDNAKQAGR KILISGGGRC NFTNLKVEPA
NFICSNPHFV KSALARYPSQ QFIELVERHG IEYHERDHGQ LFCNDSAKEI VTMLLTECEW
AGVSIKLRTD ILAVKKTEVG RFELNTSNGE LSCDSLVVAT GGLSMPKLGA TPYGYQLAEQ
FGLKVLPTHA GLVPFTWHSE DKIRFEPLSG IAVPSRITAK DGTSFSEALL FTHRGLSGPA
ILQISNYWKA GETIEINLLP NMDLAQTLEQ QLAAHPKQSL RNTLSQWLPK RLVEVLFDEA
LLNKALNQLV HAERAKLVDD LHRWTVLMNG TEGYRTAEVT LGGVDTHELS SKTMEASKVP
GLYFIGEVMD VSGWLGGFNF QWSWASGVAA GQVV
|
|---|
| |