Gene Sputcn32_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0036 
Symbol 
ID5078763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp44518 
End bp44973 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content41% 
IMG OID640497156 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001181571 
Protein GI146291147 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAA CACGCTATAC CGATTTTGGC GTTCGTACAC TTATGTATTT GGCTGTTCAG 
CCCGATAGGA CGACGCTGTT TAGAATTGCT GAAATTACCC AGGTATTTGA TTTATCACCT 
AATCATGTTT CTAAAATTGT GCATCATCTC GGTAAGCTAG GCTATTTAGA AACCATTCGA 
GGAAAAATGG GTGGCTTTCG TCTCGGCAAG CCAGCTTGCG AGATCAACTT AGGCCAATTA 
GTGCGAGTTC TTGAAAATTC ATTAGCACCA ATTGACTGTA GTAAACCTTA CTGCCGGTTT 
ACACCAGCCT GTAAGCTTAA AGGCGTCTTG GCGCATGCGG TTGATGCTTA TTTAAATGTG 
CTCGATCAAT ATAGTTTGCA AGATATAGTC AGTAATCGTG ATGAGCTGTT AGTTTTGCTG 
CCGGATTTGT CTATTTCTGT TTTACAGTTG GATTAG
 
Protein sequence
MQLTRYTDFG VRTLMYLAVQ PDRTTLFRIA EITQVFDLSP NHVSKIVHHL GKLGYLETIR 
GKMGGFRLGK PACEINLGQL VRVLENSLAP IDCSKPYCRF TPACKLKGVL AHAVDAYLNV 
LDQYSLQDIV SNRDELLVLL PDLSISVLQL D