| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0032 |
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| Symbol | aroE |
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| ID | 5078755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 36358 |
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| End bp | 37206 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640497148 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001181567 |
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| Protein GI | 146291143 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00424938 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGACA AATACGCAGT GTTTGGCAAT CCAATTAGCC ACAGTAAATC GCCGTTCATT
CATGGACAAT TTGCTGCGCC CACCCAAGAG TTATTAACCT ATGAAGCCAT TCTTGCTCCG
GTCGATGGTT TTGAAGCCTC ACTGACGGCG TTTTTCAATG CGGGCGGCAA GGGCGCGAAT
GTGACAGTGC CTTTTAAGGA GCAAGCTTTT GCGCTGTGTG ACAGTCTCAG CCCAGAGGCC
AAGCTTGCCG GCGCGGTAAA CACCTTAAGT TTATTGGCCG ATGGCACTAT TCGCGGTGAT
AACACCGATG GTTTAGGGCT GGTGGCTGAT CTCATCGCTA ACTTAGGCAG CCTGCAAGGT
AAGCGCGTGT TACTTATAGG TGCTGGTGGT GCGGCGCGCG GTTGTATTCT GCCATTATTA
AATGCGGGAA TTGCGCAGCT AACGATTAGC AATCGCACTC ACACTAAGGC ACAGCTTCTG
GTCGATATCT TTACTTCGGT GGATAACGGT GCTTTCGCAA ATAGAGTCAC CGCCGTAGAA
ATGAATGAGC TTGTGGGCGA ATTCGATATC ATTATTAACT CAACTTCGGC TAGCCTTGCG
GGCGAGTTGC CACCCGTGCC AGCGCATATC ATTACCCCTC AAACTGTCTG CTATGACATG
ATGTATGGTG CCTCAGTTAC CGCTTTTAAC CAATGGGCGC TATCCCAAGG TGCAGCTAAG
GTTATTGATG GACTCGGTAT GTTAGTCGGA CAAGCCGCTA AAAGCTTTAC CCTATGGCGA
GGTGTTGAGC CAGATACTCA AGTGGTGTTG ACTCTTTTGC GGGACAAATT AAAGGCTGAG
CCTAAGTAG
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| Protein sequence | MTDKYAVFGN PISHSKSPFI HGQFAAPTQE LLTYEAILAP VDGFEASLTA FFNAGGKGAN
VTVPFKEQAF ALCDSLSPEA KLAGAVNTLS LLADGTIRGD NTDGLGLVAD LIANLGSLQG
KRVLLIGAGG AARGCILPLL NAGIAQLTIS NRTHTKAQLL VDIFTSVDNG AFANRVTAVE
MNELVGEFDI IINSTSASLA GELPPVPAHI ITPQTVCYDM MYGASVTAFN QWALSQGAAK
VIDGLGMLVG QAAKSFTLWR GVEPDTQVVL TLLRDKLKAE PK
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