Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0029 |
Symbol | |
ID | 5078752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 34232 |
End bp | 34798 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497145 |
Product | Sua5/YciO/YrdC/YwlC family protein |
Protein accession | YP_001181564 |
Protein GI | 146291140 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.864856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAGC TGCACCCATC TGACATAAAA GATATTGTGC TTAACGGTGG TGTTATCGCT TATCCAACCG AGGCCGTTTA TGGCCTAGGT TGCGACCCAG ATAATGACAC TGCTATCCAA AAGTTATTGG CTGTAAAACA GCGCCCATGG CAAAAGGGAC TGATCTTAGT CGCCAGTGAT TTTCAGCAGC TTTTGGCTTA TGTTGATGAA TCGCAATTAA CTGCTGAGCA GCTCGAGTTT GCATTTTCCA AGTGGCCGGG GCCTTTTACC TTTGTCATGC CAATCAAAGC GCAGGTTTCA AAATACCTCT GTGGTGAATT TGACTCTATC GCAGTGCGAG TGTCGGCCCA TGCTGGAGTA CAAGCCCTGT GCCGCGCACT TAATAAACCT TTAGTGTCGA CCAGCGCTAA CCTTGCAGGT GAAGATCCCG CATTAACTGC CGCTGAAATC CTCGCCGATT TTACAGGTAA AATTGATGCA CTCGTATTAG GTGAACTTGG TGAGCAACGT CAGCCCTCGA CCATTATCGA TGCGCGAAGC GGTAAGATTT TACGAAATGG ACAATGA
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Protein sequence | MLQLHPSDIK DIVLNGGVIA YPTEAVYGLG CDPDNDTAIQ KLLAVKQRPW QKGLILVASD FQQLLAYVDE SQLTAEQLEF AFSKWPGPFT FVMPIKAQVS KYLCGEFDSI AVRVSAHAGV QALCRALNKP LVSTSANLAG EDPALTAAEI LADFTGKIDA LVLGELGEQR QPSTIIDARS GKILRNGQ
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