| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0024 |
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| Symbol | def |
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| ID | 5081499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 30062 |
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| End bp | 30574 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640497140 |
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| Product | peptide deformylase |
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| Protein accession | YP_001181559 |
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| Protein GI | 146291135 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACTAT TAAATGTTTT ACGCTTTCCT GATGAAAGAC TAAGGATCCA AGCCAAACCC
ATCACTGAGT TTGACGCAGA ACTACAGACT CAAATTGATA ACATGTTTGA AACAATGTAC
CAAGAAAAGG GTATAGGACT TGCTGCAACG CAAGTCGATT ATCATAAACA ACTTATCGTC
ATGGACTTAC AAGACGAAGT CGAGCGCCCA AAGGTGTTTA TCAATCCTGA AATTATCTCG
AGTAGTGGCG ACTTTTGTAA TGAAGAGGGT TGTCTATCTG TTCCAGGTAT CTATGCCAAA
GTGGATCGTG CCGAATTTGT CACGGTAAAA GCATTGGATA GGAATGGTTG CGAATTTATT
GTTGAAGCCG ATGAGTTATT TGCCATTTGT ATTCAACATG AAATGGACCA CCTTAAAGGC
AAATTGTTTG TCGATTATCT ATCACCGCTA AAACGTCAGC GGATCAAACA AAAACTTGAA
AAAGCGGCCA GATTGGACGC CAAAGAAGCA TAG
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| Protein sequence | MALLNVLRFP DERLRIQAKP ITEFDAELQT QIDNMFETMY QEKGIGLAAT QVDYHKQLIV
MDLQDEVERP KVFINPEIIS SSGDFCNEEG CLSVPGIYAK VDRAEFVTVK ALDRNGCEFI
VEADELFAIC IQHEMDHLKG KLFVDYLSPL KRQRIKQKLE KAARLDAKEA
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