Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0021 |
Symbol | trkA |
ID | 5081496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 26379 |
End bp | 27788 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640497137 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_001181556 |
Protein GI | 146291132 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.881079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTA TCATATTAGG TGCGGGTCAG GTTGGGGGAA CTTTGGCCGA GAATTTGGTG GGTGAAAATA ATGACATCAC CATAGTCGAT AGCGACAGAT CAAAATTACG TGCCCTACAG GATAAATATG ACCTTCGCGT TGTGGCAGGC CATGGCGCTC ATCCAGATGT GCTAAAAGAA GCCGGTGCCG AAGATGCTGA TATGCTAATT GCGGTCACTA ATAGCGATGA ATGTAATATG GCCGCCTGCC AAATTGCCTA CAGCCTATTT GGCACACCAA CAAAAATCGC CCGTATCCGC TCAGAACCCT ATCTGGCTAT GCGTGATAAA CTCTTTATTG ATAGCGAAAC CAAGAACAGT GACGGCCGTC CACGTGGTGG CTTTGTAATT GACGAACTCA TTGCTCCTGA ACAGTTAGTA ACCGCTTACA TCCAGCGCCT TGTTGAATAT CCGGGTGCAT TGCAAGTGCT CGAGTTTGCC GAAGGCAAAT TAAGCTTAGT CGCAGTACGC GCCTATTACG GTGGTCCGTT AGTGGGTAAT GCACTCGCGG CGCTACGCGA ACATATGCCC AATATTGATA CTAGAGTCGC GGCAATTTTC CGCCAAGGTA GGCCCATTAT GCCGCGCGGA ACGACAATTA TTGAAGCCGA TGATGAGGTA TTTTTCGTCG CTGACAGTCG CCATATTCGC GCCGTGATGA GCGAAATGCA AAAGCTCGAT AATACCTACC GTAATATTAT GATCGCTGGT GGCGGTAACA TAGGATTAGG GTTAGCAAAA CGCCTAGAAC GTACCCACTC GGTAAAACTT ATCGAACACA AATTTGAGCG AGCAGAATCG CTTTCGGAAC AACTCGAAAA TACAACTGTA TTTTGTGGTG ATGCTTCGGA TCAAGAATTA CTACTCGAAG AACATATTGA CCAAACAGAT GTGTTTATTG CCGTCACTAA TGATGATGAA GCCAACATTA TGTCGGCTCT TTTAGCAAAG CGTATGGGCG CAAAAAAGGT CATGGTGCTT ATTCAGCGAG AAGCCTATGT GGATATAGTG CAAGAAGCCA ATATCGATAT CGCGATTTCC CCGCAACAGG CAACCATTTC AGCCCTTCTC ACTCATATTC GTCAAGGTGA TATTTGTAAC GTCTACTCCT TACGCCGCGG CGCCGCCGAG GCGATTGAAG CCATAGCACA TGGCGATTCA AACACCTCCA AGGTAGTAGG TAAAGCCATT GGTGATATTA AATTGCCACC GGGAACGACC ATAGGTGCAA TTGTCCGCAA TGATGAAGTG CTGATGGCCC ATGATAAAAC CGTGATAGAA CAAGGAGATC ATGTCATCCT GTTCCTTGTG AATAAAAAGT TTGTCGGTGA AGTCGAAAAA CTTTTCCAAC CTAGTGCTTT CTTTTTTTAG
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Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITIVD SDRSKLRALQ DKYDLRVVAG HGAHPDVLKE AGAEDADMLI AVTNSDECNM AACQIAYSLF GTPTKIARIR SEPYLAMRDK LFIDSETKNS DGRPRGGFVI DELIAPEQLV TAYIQRLVEY PGALQVLEFA EGKLSLVAVR AYYGGPLVGN ALAALREHMP NIDTRVAAIF RQGRPIMPRG TTIIEADDEV FFVADSRHIR AVMSEMQKLD NTYRNIMIAG GGNIGLGLAK RLERTHSVKL IEHKFERAES LSEQLENTTV FCGDASDQEL LLEEHIDQTD VFIAVTNDDE ANIMSALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDS NTSKVVGKAI GDIKLPPGTT IGAIVRNDEV LMAHDKTVIE QGDHVILFLV NKKFVGEVEK LFQPSAFFF
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