Gene Sputcn32_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0015 
Symbol 
ID5081490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp21085 
End bp21699 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content44% 
IMG OID640497131 
Producthypothetical protein 
Protein accessionYP_001181550 
Protein GI146291126 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.191945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGACA GTTACCTTAT CCCGAGTGAA AATATTCAGA TTGAAGAAGA GATAAAGCAT 
AGCCGCTTTA TCTCTTTTAT CTTTCATTGC GATAGTATTG ATAAATTAAA GTTAGTGCTC 
ACTGACATAA AGCGTGATTA CCCCGGCGCA AGCCACTACT GCTATGCTTT TATCGCTGGC 
GCACCAATCG ACACTGTATT GATTGGCTCA AGTGATGACG GTGAACCCGC TGGCAGTGCT 
GGCCGCCCTA TGCTCGCTGT TTTACAAGGT GCAAATATTG GTGAAGTTGC TGCTGTGGTT 
GTGCGCTATT ATGGCGGTAC TAAACTTGGT GTGGGAGGCT TAGTTCGAGC CTATACTTCT 
GGTTTAAGAC TTGGATTGAC CAAGCTATCA ATGCAAACAA AGCAGCTGCG TTATCCTGCA 
AGGCTACAGT GTGACTACTC GCAACTAAGG GATGTAGAAT ATTCATTACA GCAAGTTGAT 
GCCGTTATGA TCAATAAGCA GTTTGCTGAA GTTGTCTATA TTGAGTTTGA AATAGGAAAG 
CTACAGCAAG AAAGGTTCAG CGAATTATTG ATGACCTTGA GCCAAGGCAG CTTAAGTGCC 
GAGTTTGAAC TGTGA
 
Protein sequence
MLDSYLIPSE NIQIEEEIKH SRFISFIFHC DSIDKLKLVL TDIKRDYPGA SHYCYAFIAG 
APIDTVLIGS SDDGEPAGSA GRPMLAVLQG ANIGEVAAVV VRYYGGTKLG VGGLVRAYTS 
GLRLGLTKLS MQTKQLRYPA RLQCDYSQLR DVEYSLQQVD AVMINKQFAE VVYIEFEIGK 
LQQERFSELL MTLSQGSLSA EFEL