| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0013 |
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| Symbol | fadB |
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| ID | 5081488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 17094 |
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| End bp | 19244 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497129 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001181548 |
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| Protein GI | 146291124 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000142726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTACC AAAGTCCTAC AATTCAAGTT GAGTTACTCG AGGATAATAT TGCCAAGCTG
TGCTTTAACG CACCCGGTTC GGTGAACAAA TTCGACAGAG AAACCCTCGC TTCGCTCGAT
GCCGCATTAG ACAGCATCAA GCAAAATTCC AATATCAAAG CGTTAGTGCT GACCTCCAGT
AAAGATACCT TTATTGTGGG TGCCGACATT ACCGAATTTT TAGGCCTATT TGCACAAGAT
GATGCTGTAC TGCTCTCTTG GGTTGAACAA GCCAACGCTG TCTTCAACAA ACTCGAAGAC
TTACCTTTCC CAACCGCATC TGCAATCAAA GGCTTTGCCT TAGGTGGCGG CTGTGAAACC
ATTCTGGCAA CGGATTTTCG TATCGCAGAT ACCACAGCCA AAATCGGTTT ACCTGAAACT
AAACTCGGCA TCATCCCAGG CTTTGGCGGC ACAGTTCGTC TGCCACGTGT AATTGGTGCA
GATAACGCAC TTGAATGGAT CTCCACAGGT AACGACCAAC GCGCTGAAGA TGCACTGAAA
GTCGGTGCTG TGGATGCTGT GGTTGCGCCA GAAGCATTAG AAGCGGCTGC GATTCAAATG
CTCAAAGATG CTGTTGCAGA AAAGCTGGAT TGGCAAGCGC GTCGTAACCG TAAGCTGTCT
GCCCTAACGC TGCCCAAACT TGAAGCTATG ATGTCATTCA CCACAGCTAA AGGCATGGTA
TTTGCTGTTG CGGGTAAACA CTACCCAGCA CCAATGGCCG CAGTAAGCGT GATTGAGCAA
GCATCGACTA AAGGTCGTGC TGAAGCATTA CAAATCGAAC ATCAAGCCTT TATCAAGCTG
GCTAAAACCG ACGTTGCTAA GGCACTTATA GGTATCTTCC TTAATGATCA ACTCGTTAAA
GGCAAAGCGA AAAAAGCGGG TAAGTTAGCC AAAGAAGTGA AAAACGCTGC CGTATTAGGT
GCTGGCATTA TGGGCGGCGG CATCGCCTAC CAAAGCGCCA GCAAAGGCAC ACCGATTGTC
ATGAAAGACA TTGCCCAGCC AGCATTAGAT TTAGGCCTCA ATGAAGCCGC CAAACTGCTA
TCGGCGCAAG TTGCTCGTGG CCGTTCAACG CCAGAAAAAA TGGCCAAAGT GCTGAACAAC
ATCACGCCTT CATTAGATTA TGCTGCGCTC AAACACAGTG ATGTCGTCGT TGAAGCCGTT
GTTGAACATC CAAAAATTAA AGCACAGGTT TTAGCCGAAG TTGAAGGTTA TGTGAGTGAA
GATGCGATTA TCGCGTCAAA CACCTCAACG ATTTCAATCA ACTTGCTCGC TAAGAGCATG
AAGAAACCTG AGCGTTTCTG CGGTATGCAT TTCTTCAACC CAGTGCACAA AATGCCGTTG
GTAGAAGTTA TCCGTGGCGA GCACAGCTCT GAAGAAACCA TCGCCTCTGT TGTGGCTTAC
GCCAGCAAAA TGGGCAAAAC CCCAATCGTG GTTAATGATT GCCCAGGCTT CTTCGTTAAC
CGCGTACTCT TCCCTTACTT TGCAGGCTTT AACGGCCTAC TTGCCGAAGG TGGCGACTTT
GCTGCAATCG ACAAAGTTAT GGAAAAACAA TTTGGTTGGC CAATGGGCCC AGCTTACCTA
CTCGACGTAG TGGGTTTAGA CACAGGTCAC CATGCCCAAG CAGTAATGGC TGAAGGTTTC
CCTGATCGTA TGGGTAAATC TGGTACCGAC GCGATTGATG TGATGTTTGA GAACAAGCGC
CTTGGCCAGA AAAATGGCAA AGGTTTCTAT GTCTATTCAG TTGATAGCCG TGGCAAACCG
AAGAAAGATG TCGATCCTAC GAGCTACGGC CTATTGAAAG ATGCCTTTGG CGAGTTAAAA
ACCTTTGAAG CCGATGACAT TATTGCCCGT ACTATGATCC CTATGATCAT AGAAACCGTG
CGCTGTTTAG AAGAAGGCAT TGTCGCATCA CCTGCCGAAG CGGATATGGG CCTGGTTTAT
GGCTTAGGTT TCCCGCCATT CAGAGGAGGC GTGTTCCGTT ACTTGGATAC CATGGGTGTC
GCAAACTTTG TGGCCTTAGC AGACAAATAT GCTCACTTGG GCGGTCTGTA TCAAGTCACA
GATGCGATGC GTACAAAAGC CACCAATAAT GGTAGCTACT ACCAAGCCTA A
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| Protein sequence | MIYQSPTIQV ELLEDNIAKL CFNAPGSVNK FDRETLASLD AALDSIKQNS NIKALVLTSS
KDTFIVGADI TEFLGLFAQD DAVLLSWVEQ ANAVFNKLED LPFPTASAIK GFALGGGCET
ILATDFRIAD TTAKIGLPET KLGIIPGFGG TVRLPRVIGA DNALEWISTG NDQRAEDALK
VGAVDAVVAP EALEAAAIQM LKDAVAEKLD WQARRNRKLS ALTLPKLEAM MSFTTAKGMV
FAVAGKHYPA PMAAVSVIEQ ASTKGRAEAL QIEHQAFIKL AKTDVAKALI GIFLNDQLVK
GKAKKAGKLA KEVKNAAVLG AGIMGGGIAY QSASKGTPIV MKDIAQPALD LGLNEAAKLL
SAQVARGRST PEKMAKVLNN ITPSLDYAAL KHSDVVVEAV VEHPKIKAQV LAEVEGYVSE
DAIIASNTST ISINLLAKSM KKPERFCGMH FFNPVHKMPL VEVIRGEHSS EETIASVVAY
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF NGLLAEGGDF AAIDKVMEKQ FGWPMGPAYL
LDVVGLDTGH HAQAVMAEGF PDRMGKSGTD AIDVMFENKR LGQKNGKGFY VYSVDSRGKP
KKDVDPTSYG LLKDAFGELK TFEADDIIAR TMIPMIIETV RCLEEGIVAS PAEADMGLVY
GLGFPPFRGG VFRYLDTMGV ANFVALADKY AHLGGLYQVT DAMRTKATNN GSYYQA
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