Gene Sputcn32_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0008 
Symbol 
ID5081483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp10805 
End bp11401 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content45% 
IMG OID640497124 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_001181543 
Protein GI146291119 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGA TCCGCTGTGG CTGGGTAAGT GATGATCCCT TATATCGTGA GTATCACGAC 
AAAGTGTGGG GGCGACCTGT TTATGATCCA AAGGAGCTGT TTGCTAAGTT GTGTTTAGAT 
GGTCAACAGG CCGGATTATC TTGGATAACT ATCCTGAAGA AGCAACAAAA CTATGAACAG 
GCCTTTGCTA ATTTTGAACC TGAGATAATT GCCACCTTCG ATGAGGCGAA AGTGGAGGAA 
CTTATGTTGA ATCCCGGTAT AGTGCGCAAC CGCTTGAAGG TGAACTCTAT CATCAAGAAT 
GCCAAAGGTT ATTTAGCCTA TACTGCCGAT GGGAAGGATT TCTCTGCATT TTTATGGAGC 
TTTGTGGGCG GTAAACCCAT AGTTAATCAG ATTACGGCAA TGTCGCAGGT TCCGGCACAA 
ACGCCAGAAT CTGAAGCCAT GTCAAAAGCG TTGAAGAAAC TCGGATTCAA TTTTGTCGGC 
CCAACCATTT GTTATGCCTT TATGCAGGCT GTGGGTATGG TGAACGATCA TCTTGTCGAG 
TGTATTGCTT ATCAGGCCTG TGTAGATTCT TGTGCCGGAC TGCATAATCA CGAGTAA
 
Protein sequence
MEEIRCGWVS DDPLYREYHD KVWGRPVYDP KELFAKLCLD GQQAGLSWIT ILKKQQNYEQ 
AFANFEPEII ATFDEAKVEE LMLNPGIVRN RLKVNSIIKN AKGYLAYTAD GKDFSAFLWS 
FVGGKPIVNQ ITAMSQVPAQ TPESEAMSKA LKKLGFNFVG PTICYAFMQA VGMVNDHLVE 
CIAYQACVDS CAGLHNHE