| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0006 |
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| Symbol | glyS |
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| ID | 5081481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 7702 |
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| End bp | 9771 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497122 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001181541 |
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| Protein GI | 146291117 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTG AAAACTTACT CATAGAGTTA GGCACGGAAG AGTTACCACC CAAGTCACTG
CGTAAACTGG CTGAATCCTT TTTAGCTAAC TTTACTGAAG AACTCACCAA AGCCGATTTA
GCGTTCAGCT CAGCCGTTTG GTACGCAGCG CCACGTCGTC TGGCAATTAA CGTCACTGAA
CTTGCCCTTG CGCAAGCCGA CAAAGTCGTT GAAAAACGCG GCCCAGCAGT GAGTTCAGCA
TTCGATGCTG AAGGCAAACC GACTAAAGCC GCCGAAGGTT GGGCACGTGG TAATGGTATT
ACTGTTGAAC AAGCCGAACG TTTAGTTACA GATAAAGGCG AATGGTTAGT CCATAACGCC
AAAGTTGAAG GCGTCGAAAC AAAAAGTTTA ATCGCTGCTA TGGCGCAACG TGCACTCGAT
AAATTGCCCA TTCCTAAGCC AATGCGTTGG GGCAATAATA AAACCCAATT TATTCGCCCT
GTTCATACTG CCACTATCTT GTTAGGCAGT GAGTTGATTG AAGGTGAATT GCTGGGTATC
AAATCGGCAC GCACTGTTCG CGGTCACCGC TTTATGGGCC TAAAGCAGTT TGAATTAGCC
CATGCAGATC ACTACCTTGC CGACCTAAAA GAAAAAGGCA AAGTCATCGC CGATTACGAA
AGCCGTAAAG CATTAATCAA AGCCGATGCC GAAAAAGCCG CAGCTAAGAT TGGTGGCACA
GCCGATATCG AAGATAGCCT ACTTGAAGAA GTCGCCTCTT TGGTTGAATG GCCAGTGGTA
TTGACCGCTA GCTTCGAAGA AAAATTCTTA AGTGTGCCGT CTGAAGCTTT GGTCTATACC
ATGAAGGGCG ATCAAAAATA CTTCCCTGTC TTTGATAATG CAGGCAAGTT ACTGCCAAAC
TTTATCTTTG TGGCCAATAT CGAATCAAAA GATCCCGCGC AAATTATCTC TGGTAACGAG
AAAGTGGTTC GCCCACGTCT TGCCGACGCC GAGTTCTTTT TTAATACCGA TAAAAAACAC
ACGCTGGAAT CGCGTTTACC GAGTCTTGAA ACCGTCCTGT TCCAACAGCA GCTCGGTACC
TTAAAAGACA AAGTGAATCG TATTTCTGCC CTAGCCGCCT TTATTGCAGA GCAAACTGGC
GCGAATGCGG TTGATGCAGC TCGTGCAGGT TTGTTATCTA AAACCGATTT GATGACCAAT
ATGGTGATGG AGTTTACCGA CACTCAAGGC ACTATGGGCA TGCACTACGC CCGCCTTGAT
GGTGAAACCG AAGCCGTTGC GGTTGCGATG GAAGAGCAAT ACAAGCCTAA GTTCTCTGGC
GATACAGTGC CTAGCGCAGG CGTTTCTTGC GCAGTCGCAT TAGCAGATAA ACTCGACACT
TTAGTTGGTA TCTTTGGTAT TGGCCAAGCA CCAAAAGGCG CAGCCGATCC CTTTGCCCTA
CGCCGTGCCG CCATCGGTGT GCTGCGTATT ATCGTTGAGA ACAAACTGCC ACTGGACTTA
GTAACGCTGA TTGCTAAAGC TCAGGAGCTC CACGGTACTC ACTTAAGCAA CGCCAATGCA
AGCGACGAAG TGTTAGAGTT CTTAATGGCT CGCTTCCGCG CTTGGTATCA AGATAAAGGC
ATTGGTGTTG ATGTGATCTT AGCAGTGCTA GCACGTCGCC CAACACGCCC AGCTGATTTT
GATAGTCGTA TCAATGCGGT ATCACACTTT AGAAGCCTAG AAGCTTCTGG CGCACTTGCA
GCAGCGAACA AACGTGTATC TAACATTCTG GCGAAGGTTG AAGGCGCTTT ACCAACTACT
ATCGATGCGA GTTTGTTAAC CGAAGCCGCA GAGCAAGCAT TAGCGGCCAA GTTGAATGAG
CTGCAACCAC AGTTGGCACC TTTATTTGCC AATGCCGATT ACCAACAAGC CTTAACTTTG
TTAGCTGGCC TGCGTGAAAG CGTGGATCAG TTCTTCGAAG ATGTGATGGT TATGGCGGAT
GATGAAGCAT TGAAAAACAA TCGTTTAGCA TTGTTGAATA ATCTACGCGA GCAGTTCCTG
CACGTAGCGG ATATCTCATT ACTGCAATAA
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| Protein sequence | MNFENLLIEL GTEELPPKSL RKLAESFLAN FTEELTKADL AFSSAVWYAA PRRLAINVTE
LALAQADKVV EKRGPAVSSA FDAEGKPTKA AEGWARGNGI TVEQAERLVT DKGEWLVHNA
KVEGVETKSL IAAMAQRALD KLPIPKPMRW GNNKTQFIRP VHTATILLGS ELIEGELLGI
KSARTVRGHR FMGLKQFELA HADHYLADLK EKGKVIADYE SRKALIKADA EKAAAKIGGT
ADIEDSLLEE VASLVEWPVV LTASFEEKFL SVPSEALVYT MKGDQKYFPV FDNAGKLLPN
FIFVANIESK DPAQIISGNE KVVRPRLADA EFFFNTDKKH TLESRLPSLE TVLFQQQLGT
LKDKVNRISA LAAFIAEQTG ANAVDAARAG LLSKTDLMTN MVMEFTDTQG TMGMHYARLD
GETEAVAVAM EEQYKPKFSG DTVPSAGVSC AVALADKLDT LVGIFGIGQA PKGAADPFAL
RRAAIGVLRI IVENKLPLDL VTLIAKAQEL HGTHLSNANA SDEVLEFLMA RFRAWYQDKG
IGVDVILAVL ARRPTRPADF DSRINAVSHF RSLEASGALA AANKRVSNIL AKVEGALPTT
IDASLLTEAA EQALAAKLNE LQPQLAPLFA NADYQQALTL LAGLRESVDQ FFEDVMVMAD
DEALKNNRLA LLNNLREQFL HVADISLLQ
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