Gene Ent638_3972 details

Gene Information

• Locus tag: Ent638_3972
• Symbol: rhtB
• ID: 5114692
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Enterobacter sp. 638
• Kingdom: Bacteria
• Replicon accession: NC_009436
• Strand: +
• Start bp: 4305237
• End bp: 4305857
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640494186
• Product: homoserine/homoserine lactone efflux protein
• Protein accession: YP_001178678
• Protein GI: 146313604
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein
• TIGRFAM ID: [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.422052
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCTTCG AGTGGTGGTT CGCTTACCTG CTGACATCCA TTATCCTGAG CCTTTCACCG 
GGTTCTGGCG CAATCAATAC CATGACCACC TCCATTAGCC ACGGTTATCG CGGTGCAGCG 
GCGTCAATCG CCGGCTTGCA GACGGGTTTG GGGATCCACA TCGTGCTGGT CGGCATCGGT 
TTGGGCACGC TTTTCTCGCA ATCAATTCTG GCCTTTGAAG TACTGAAATG GGCGGGCGCG 
GCGTATCTGA TTTGGCTGGG CATCCAGCAA TGGCGCGCGG CGGGTTCAAT TGACCTGAAC 
ACGCTGGCGC ACACGCAAAC CCGTGGGCGA CTGTTCAAAC GCGCCGTGTT CGTCAATCTG 
ACCAACCCGA AAAGCATCGT CTTTTTGGCC GCGCTGTTCC CGCAGTTTAT CGTCCCGCAT 
CAGCCGCAGG TGATGCAGTA CATCGTGCTC GGCGCGACGA CGATTATTGT CGATATCATC 
GTGATGATTG GCTACGCGAC GCTGGCGCAG CGGATTGCGG GATGGATTAA AGGGCCTAAG 
CAGATGAAGG CCCTGAATAA AGTCTTTGGA TCGCTGTTTA TGCTGATTGG CGCGCTGCTT 
GCGTCAGCGC GTCATGCTTA G 

 

Protein sequence

MTFEWWFAYL LTSIILSLSP GSGAINTMTT SISHGYRGAA ASIAGLQTGL GIHIVLVGIG 
LGTLFSQSIL AFEVLKWAGA AYLIWLGIQQ WRAAGSIDLN TLAHTQTRGR LFKRAVFVNL 
TNPKSIVFLA ALFPQFIVPH QPQVMQYIVL GATTIIVDII VMIGYATLAQ RIAGWIKGPK 
QMKALNKVFG SLFMLIGALL ASARHA