Gene Ent638_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_3953 
SymbolrfaH 
ID5114673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp4285135 
End bp4285626 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content54% 
IMG OID640494167 
Producttranscriptional activator RfaH 
Protein accessionYP_001178659 
Protein GI146313585 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR01955] transcriptional activator RfaH 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.038453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGT GGTATTTACT GTATTGCAAA CGTGGGCAGC TCCAGCGTGC GCAGGAACAT 
CTTGAGCGTC AGGCCGTTAA TTGTCTGACC CCTGTTATCA CGCTCGAAAA AATCCAGCGC
GGTAAGCGCA CTATGGTCAG CGAACCCCTT TTCCCGAACT ACCTGTTCGT CGAGTTTGAC
CCGGAAGTGA TTCACACCAC AACCATCAAC GCCACGCGTG GCGTCAGCCA CTTCGTTCGC
TTTGGTGCGC AACCCGCCAC CGTTCCTTCT ACGGTTATTC ACCAGCTTTC TGTCTATAAA
CAGCCGGACG ATATTACCGA TCCCGACACG CCCTTCTGCG GCGATGATGT GGTGATCACC
GAAGGCGCAT TCGAAGGATT GCAGGCGATA TTCTCTGAGC CGGACGGCGA AGCCCGCTCA
ATGCTGCTAC TCAACTTGCT GAACAAACAA GTGCTCCAGA GCGTTGCAAA CACCGCCTTC
CGCAAAGTTT AA
 
Protein sequence
MQAWYLLYCK RGQLQRAQEH LERQAVNCLT PVITLEKIQR GKRTMVSEPL FPNYLFVEFD 
PEVIHTTTIN ATRGVSHFVR FGAQPATVPS TVIHQLSVYK QPDDITDPDT PFCGDDVVIT
EGAFEGLQAI FSEPDGEARS MLLLNLLNKQ VLQSVANTAF RKV