Gene Ent638_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_3876 
Symbol 
ID5110603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp4187001 
End bp4187984 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content55% 
IMG OID640494085 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_001178582 
Protein GI146313508 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0954315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA CCCTCAAGCC GTTACTGGCC TCTTTGTGCC TGTCCACCGC GTCACTGCTG 
TTCGCCACCA CGGCGGCAGC GCAAACGATC AAAGCTGCTG ATGTTCACCC TGAAGGCTAC
CCAAACGTGG TGGCCGTGCA AAACATGGGT GAAAAACTCA ACCAACAAAC CGATGGCAAG
CTGGGGATCA AAGTCTTCCC TGGCGGTGTC CTGGGCGACG AAAAGCAAAT GATTGAGCAG
GCGCAGATGG GCGCTATCGA TATCATTCGC GTCTCAATGG CACCTGTTGC GGCGATTTTG
CCGGATATCG AAGTGTTCAC ACTGCCTTAC GTGTTCCGCG ATGAAGACCA TATGCACAAG
GTGATCGACG GTGATATCGG CAAAGAGATT GGCGAAAAAC TCACGGCTAA CCCGAAGTCG
CGCCTGGTGT TTCTGGGCTG GATGGACTCC GGCACGCGTA ATCTGATCAC CAAAGAGCCG
ATCGTCAAAC CAGAAGACCT GAAAGGCAAG AAAATCCGCG TGCAGGGCAG CCCGGTCGCA
CTGGCAACCT TGAAAGCGAT GGGGGCCAAC TCGGTGGCGA TGGGCGTCAG CGAAGTCTAT
AGCGGGATGC AAACCGGGGT GATCGACGGC GCGGAAAACA ATCCGCCAAC CTTTGTGGCG
CATAACTACA TGCCGGTTGC CAAAAACTAC ACCCTCAGCG GCCACTTCAT CACGCCGGAA
ATGCTCCTGT ACTCCAAAGT GAAATGGGAC AAACTCAGCG CTGAGGAGCA GCAAAAAATC
AAAACTCTGG CCCGTGAAGC GCAATTTGAA CAGCGCAAAC TCTGGGACGC TTACAACCAG
CAGGCGCTGG ATAAAATGAA AGCGGGCGGC GTGCAATTCC ACGATATCGA CAAAGCGGTG
TTTATCAAAG CGACAGAACC GGTGCGCGCG CAGTACGGCG ATAAGCACAA GGAACTGATG
CAGGCCATCG CGGACGTCAA GTAA
 
Protein sequence
MKTTLKPLLA SLCLSTASLL FATTAAAQTI KAADVHPEGY PNVVAVQNMG EKLNQQTDGK 
LGIKVFPGGV LGDEKQMIEQ AQMGAIDIIR VSMAPVAAIL PDIEVFTLPY VFRDEDHMHK
VIDGDIGKEI GEKLTANPKS RLVFLGWMDS GTRNLITKEP IVKPEDLKGK KIRVQGSPVA
LATLKAMGAN SVAMGVSEVY SGMQTGVIDG AENNPPTFVA HNYMPVAKNY TLSGHFITPE
MLLYSKVKWD KLSAEEQQKI KTLAREAQFE QRKLWDAYNQ QALDKMKAGG VQFHDIDKAV
FIKATEPVRA QYGDKHKELM QAIADVK