| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_3794 |
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| Symbol | nirD |
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| ID | 5110838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Enterobacter sp. 638 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009436 |
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| Strand | + |
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| Start bp | 4091257 |
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| End bp | 4091583 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640494003 |
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| Product | nitrite reductase small subunit |
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| Protein accession | YP_001178500 |
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| Protein GI | 146313426 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.013198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGT GGGTAAACAT CTGCAAAGTT AACGACATCA TCCCAGCGAC CGGCGTTTGT
GCCTTGCTGG GGACGGAACA GGTCGCCATT TTCCGCCCTC GTCATGACGA ACAGGTCTTT
GCGATCAGCA ATATCGACCC GTTCTTTCAG GCAAGCGTAC TGTCGCGCGG TTTGATCGCG
GAGCATCAGG GCGAACTGTG GGTGGCGAGT CCACTGAAAA AACAGCGTTT CCGTTTAAGC
GACGGACACT GCATGGAAGA TGAAAGCCAC TCTGTGAAGC ACTATGACGT CCGCGTGAAA
GACGGCAACG TGCAGCTGAG GGGCTGA
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| Protein sequence | MSQWVNICKV NDIIPATGVC ALLGTEQVAI FRPRHDEQVF AISNIDPFFQ ASVLSRGLIA
EHQGELWVAS PLKKQRFRLS DGHCMEDESH SVKHYDVRVK DGNVQLRG
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