Gene Ent638_3699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_3699 
Symbol 
ID5112257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp4009256 
End bp4010221 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content52% 
IMG OID640493904 
ProducttRNA-dihydrouridine synthase B 
Protein accessionYP_001178407 
Protein GI146313333 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00737] putative TIM-barrel protein, nifR3 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.426337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GACACTATCA GCTCAGAAAT CGCCTGATCG CAGCGCCAAT GGCAGGTATT 
ACTGACCGGC CTTTCCGGAC GCTGTGCTAC GAGATGGGAG CCGGTTTAAC CGTTTCCGAG
ATGATGTCGT CTAACCCGCA GGTTTGGGAA AGCGATAAAT CCCGTCTACG GATGGTGCAC
GTTGATGAGC CAGGTATTCG CACCGTGCAA ATTGCTGGAA GCGATCCTGA AGAAATGGCG
CAAGCCGCGC GTATTAACGT TGAAAGTGGC GCCCAAATTA TTGATATCAA TATGGGTTGC
CCGGCAAAAA AGGTGAATCG TAAGCTTGCA GGTTCAGCCC TTCTGCAATA CCCCGACCAG
GTGAAGTCTA TCTTGTTGGG GGTGGTTAAC GCAGTGGATG TTCCCGTTAC GTTGAAAATT
CGCACTGGTT GGGCGCCGGA ACACCGTAAC TGTGTAGAAA TTGCCCAACT GGCCGAAGAT
TGTGGTATCC AGGCCCTGAC CATTCATGGA CGCACTCGCG CCTGTTTGTT CAACGGCAAT
GCGGAATACG ACAGCATTCG GGCAGTTAAG CAGAAAGTTT CCATTCCGAT TATCGCGAAT
GGCGACATAA CTGACCCGCT AAAAGCCAGG GCTGTGCTCG ACTATACAGG GGCAGATGCT
CTGATGATAG GACGTGCCGC TCAGGGAAGA CCCTGGATCT TTCGGGAAAT CCAGCATTAT
CTGGACACTG GGGAGTTGCT TGATCCACTG CCTCTGGCAG AAGTTAAGCG CTTGCTTTGT
GCGCATATTC GGGAACTGCA TGACTTTTAC GGTCAGGCAA AAGGGTACCG AATTGCGCGG
AAACACGTAT CCTGGTATCT CCAGGAACAC GCTCCAAATG ACCAGTTTCG GCGCACATTC
AACGCCATAG AGGATGCCAG CGTACAGCTG GAGGCGTTGG AGGCATACTT CGAAAATTTT
GCGTAA
 
Protein sequence
MRIGHYQLRN RLIAAPMAGI TDRPFRTLCY EMGAGLTVSE MMSSNPQVWE SDKSRLRMVH 
VDEPGIRTVQ IAGSDPEEMA QAARINVESG AQIIDINMGC PAKKVNRKLA GSALLQYPDQ
VKSILLGVVN AVDVPVTLKI RTGWAPEHRN CVEIAQLAED CGIQALTIHG RTRACLFNGN
AEYDSIRAVK QKVSIPIIAN GDITDPLKAR AVLDYTGADA LMIGRAAQGR PWIFREIQHY
LDTGELLDPL PLAEVKRLLC AHIRELHDFY GQAKGYRIAR KHVSWYLQEH APNDQFRRTF
NAIEDASVQL EALEAYFENF A