| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_3473 |
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| Symbol | |
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| ID | 5112977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Enterobacter sp. 638 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009436 |
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| Strand | + |
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| Start bp | 3780777 |
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| End bp | 3782672 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640493677 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001178183 |
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| Protein GI | 146313109 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0442977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.143212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGTAG CTGCACCGCC GACACCAATC AAACGAAATA AGTGTGGATA CCGTCTTATG
GAGCAAAACC CGCAGTCACA GCTGAAACTT CTTGTCCAAC GCGGTAAGGA GCAAGGCTAT
CTGACCTATG CCGAGGTCAA TGACCATCTG CCGGAAGATA TCGTCGATTC AGATCAAATC
GAAGACATCA TCCAAATGAT CAATGACATG GGTATTCAGG TGATGGAAGA AGCACCTGAT
GCCGATGATC TGTTGCTGGC TGAAAACTCC AACAACACCG ATGAAGATGC TGAAGAAGCC
GCTGCACAGG TTCTGTCCAG CGTTGAATCT GAAATCGGTC GTACCACTGA CCCGGTGCGC
ATGTACATGC GCGAAATGGG AACCGTTGAA CTGCTGACCC GCGAAGGCGA AATCGACATC
GCGAAACGCA TCGAAGACGG GATCAACCAG GTTCAGTGTT CTGTTGCCGA GTACCCGGAA
GCGATCACCT ATCTGCTGGA ACAGTACGAT CGCGTAGAAG CAGAAGAGGC GCGTCTTTCC
GACATCATTA CCGGTTTCGT CGATCCTAAC GCTGAAGAAG AAGTCGCTCC GACTGCTACT
CACGTTGGTT CTGAGCTCAC GAAAGAAGAG CGTGAAGAGA ACGAGGAAGA AGACGAAGAA
GACGAAGAAG AAGAAGACGA CAACAGCATC GATCCTGAGC TGGCTCGCGA GAAGTTTGGC
GAACTGCGTA CGCAGTACGA ACTGGCCCGC GACACCATCA AAGCAAAAGG CCGTAGTCAC
GCCGCTGCGA AGGAAGAGAT CCAGAAGCTG TCTGACGTGT TCAAGCAGTT CCGCCTGGTA
CCAAAGCAGT TTGATTACCT GGTCAACAGT ATGCGCGTCA TGATGGATCG CGTGCGAACT
CAGGAACGCA TCATCATGAA ACTGTGCGTT GAACAGTGCA AAATGCCGAA GAAAAACTTC
ATCACACTGT TCACCGGCAA CGAAACCAGC GAAACCTGGT TCAACGCTGC TATCGCCATG
AACAAACCGT GGTCTGAAAA GCTGCACGAC GTCTCTGATG ACGTTCAGCG CGGCTTGCAG
AAACTGCGTC AGATTGAAGA AGAGACCGGC CTGACCATCG AGCAGGTGAA AGACATCAAC
CGTCGTATGT CTATCGGCGA AGCGAAAGCC CGTCGTGCGA AGAAAGAGAT GGTTGAGGCG
AACTTGCGTC TGGTTATTTC TATCGCGAAG AAATACACCA ACCGCGGTCT GCAGTTCCTG
GATCTGATTC AGGAAGGCAA CATCGGTCTG ATGAAAGCGG TAGATAAGTT TGAATACCGT
CGTGGTTATA AATTCTCCAC TTACGCAACC TGGTGGATTC GTCAGGCGAT CACCCGCTCT
ATCGCGGATC AGGCGCGCAC CATCCGTATT CCGGTGCATA TGATTGAGAC GATTAACAAG
CTCAACCGTA TTTCTCGCCA GATGCTGCAA GAGATGGGCC GCGAGCCAAC GCCGGAAGAA
CTGGCTGAAC GCATGTTGAT GCCGGAAGAC AAGATCCGTA AAGTGCTGAA AATCGCGAAA
GAGCCAATCT CCATGGAAAC GCCAATCGGC GACGATGAAG ATTCGCATCT GGGTGATTTC
ATCGAGGATA CTACCCTCGA GCTGCCGCTG GACTCTGCGA CGACCGAGAG CCTGCGTGCT
GCCACTCACG ACGTTCTGGC CGGCCTGACC GCCCGCGAAG CGAAAGTCCT GCGTATGCGT
TTCGGTATCG ACATGAATAC CGACCACACG CTGGAAGAAG TGGGTAAACA GTTCGACGTA
ACCCGCGAAC GTATTCGTCA GATCGAAGCG AAGGCACTGC GCAAACTGCG CCACCCTAGC
CGCTCTGAAG TTCTGCGTAG CTTCCTGGAC GATTAA
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| Protein sequence | MLVAAPPTPI KRNKCGYRLM EQNPQSQLKL LVQRGKEQGY LTYAEVNDHL PEDIVDSDQI
EDIIQMINDM GIQVMEEAPD ADDLLLAENS NNTDEDAEEA AAQVLSSVES EIGRTTDPVR
MYMREMGTVE LLTREGEIDI AKRIEDGINQ VQCSVAEYPE AITYLLEQYD RVEAEEARLS
DIITGFVDPN AEEEVAPTAT HVGSELTKEE REENEEEDEE DEEEEDDNSI DPELAREKFG
ELRTQYELAR DTIKAKGRSH AAAKEEIQKL SDVFKQFRLV PKQFDYLVNS MRVMMDRVRT
QERIIMKLCV EQCKMPKKNF ITLFTGNETS ETWFNAAIAM NKPWSEKLHD VSDDVQRGLQ
KLRQIEEETG LTIEQVKDIN RRMSIGEAKA RRAKKEMVEA NLRLVISIAK KYTNRGLQFL
DLIQEGNIGL MKAVDKFEYR RGYKFSTYAT WWIRQAITRS IADQARTIRI PVHMIETINK
LNRISRQMLQ EMGREPTPEE LAERMLMPED KIRKVLKIAK EPISMETPIG DDEDSHLGDF
IEDTTLELPL DSATTESLRA ATHDVLAGLT AREAKVLRMR FGIDMNTDHT LEEVGKQFDV
TRERIRQIEA KALRKLRHPS RSEVLRSFLD D
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