| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_3357 |
|---|
| Symbol | |
|---|
| ID | 5111871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | + |
|---|
| Start bp | 3663540 |
|---|
| End bp | 3664241 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640493563 |
|---|
| Product | alanine racemase domain-containing protein |
|---|
| Protein accession | YP_001178070 |
|---|
| Protein GI | 146312996 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00164594 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA TTGCGCATAA CCTGGCACAG GTCAGGGAAA AAATCTCAGC TGCAGCAACA
CGTTGCGGCC GTGCTTCAGA AGATGTTTCG CTGCTTGCAG TCAGTAAAAC CAAACCTGCG
AGCGCCATCG CAGAAGCTAT TGCCGCAGGG CAACGTGAGT TTGGTGAAAA CTACGTTCAG
GAGGGTGTGG ACAAAATTCG TCATTTCCAG GAAACAGGAA TGATGGGTCT ACAATGGCAC
TTTATTGGTC CGTTGCAGTC GAATAAAAGT CGTCTGGTGG CCGAGCATTT TGACTGGTGC
CATACCGTCG ATCGTCTGCG CATTGCCACG CGTTTGAACG AGCAACGCCC TGCGGACAAA
GCGCCACTGA ACGTATTGAT TCAAATAAAT ATTAGTGACG AAAACAGTAA GTCAGGCATT
GCGCTTGCTG AGCTTGACGC GCTGGCCGCT CAGGTGGCGG AACTCCCCGG TCTTCGTCTG
CGTGGACTGA TGGCGATCCC CGCCCCAAAA ACAGAGTATG AAAGGCAGTT TGCCGTGGCA
CAGCAAATGG CTGTAGCATT TGAAGCGCTT AAAGCACGCT ACGTAACCGT AGACACGCTT
TCACTGGGCA TGTCGGACGA TATGGAAGCC GCAATCGCGG CAGGCAGCAC GATGGTGCGC
ATCGGCACAG CAATTTTCGG TGCGCGCGAT TACACCCAAT AA
|
|---|
| Protein sequence | MNDIAHNLAQ VREKISAAAT RCGRASEDVS LLAVSKTKPA SAIAEAIAAG QREFGENYVQ
EGVDKIRHFQ ETGMMGLQWH FIGPLQSNKS RLVAEHFDWC HTVDRLRIAT RLNEQRPADK
APLNVLIQIN ISDENSKSGI ALAELDALAA QVAELPGLRL RGLMAIPAPK TEYERQFAVA
QQMAVAFEAL KARYVTVDTL SLGMSDDMEA AIAAGSTMVR IGTAIFGARD YTQ
|
|---|
| |