Gene Ent638_3244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_3244 
Symbol 
ID5112958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp3536507 
End bp3537292 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content54% 
IMG OID640493448 
ProducttRNA pseudouridine synthase C 
Protein accessionYP_001177959 
Protein GI146312885 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.392486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG AGATCCTGTA TCAGGATGAA TGGATCGTTG CCGTTAACAA GCCGTCAGGC 
TGGTTGGTTC ACCGTAGCTG GCTGGATCGC GATGAAAAAG TCGTGGTAAT GCAAACCGTG
CGCGACCAGA TTGGTCAGCA CGTTTTTACC GTACACCGCC TCGACAGACC CACGTCCGGC
GTTTTGCTGA TGGGCCTTTC CAGCGAAGCC GGACGTTTGC TCTCCCAGCA GTTCGAGCAG
CATCAAATTC AAAAGCGCTA CCACGCTATC GTGCGTGGCT GGCTGATGGA TGAAGCGACG
CTCGATTATC CGTTGGTTGA AGAGCTGGAT AAAATCGCAG ACAAATTTGC CCGCGAAAAC
AAAGATCCTC AGCCTGCAGT GACGGATTAC CGTGGTCTTG CCACCGTTGA AATGCCCGTT
GCGACAGGGA AGTTCCCAAC GACACGTTAT GGTTTGGTAG AACTGGAACC CAAAACTGGA
CGTAAACACC AGTTGCGTCG CCATCTTTCT CACCTGCGTC ATCCGATTAT TGGTGACAGC
AAACACGGCG ATTTGCGCCA GAACCGCAGT GCGGCCGAGC ACTTTGGTTG TGACCGATTG
ATGCTACACG CCAGCCAGCT CAGCCTGACG CACCCTTTTA CCGGCGAACC GCTGGTGATT
CGTGCGGGTC TGGACGATGT ATGGATGCAG GCGCTATCAC AGTTTGGCTG GCTGGGACAA
CTCCCCGAAA ATGAAAGGGT TGAGTTTGTC GCCAGCAACG TTCAGGATGA ACAGCAAGAG
CAATAA
 
Protein sequence
MTIEILYQDE WIVAVNKPSG WLVHRSWLDR DEKVVVMQTV RDQIGQHVFT VHRLDRPTSG 
VLLMGLSSEA GRLLSQQFEQ HQIQKRYHAI VRGWLMDEAT LDYPLVEELD KIADKFAREN
KDPQPAVTDY RGLATVEMPV ATGKFPTTRY GLVELEPKTG RKHQLRRHLS HLRHPIIGDS
KHGDLRQNRS AAEHFGCDRL MLHASQLSLT HPFTGEPLVI RAGLDDVWMQ ALSQFGWLGQ
LPENERVEFV ASNVQDEQQE Q