| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_3218 |
|---|
| Symbol | ispD |
|---|
| ID | 5112932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | - |
|---|
| Start bp | 3504395 |
|---|
| End bp | 3505105 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640493422 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_001177933 |
|---|
| Protein GI | 146312859 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.45062 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGA CTATTTCGGA TGTATGCGCC GTGGTACCGG CCGCTGGCTT TGGTCGGCGC
ATGCAGACAG AGTGCCCTAA GCAATACCTT TCAATCGGTG ATAAAACGAT CCTTGAGCAT
ACCGTGGCGG CGCTGCTGGC GAATCCACGG GTGACGCGCG TCGTTATCGC TATCAGTCCG
GGCGATGCCC GTTTTGCCGC GTTACCGCTG GCGAATCATC CGCAAATTAC CGTTGTTGAC
GGTGGCACAG AACGTGCCGA CTCGGTGCTG GCAGGCATTC GGGCGGCGGG GAATGTCGCG
TGGGTGTTGG TTCACGATGC CGCGCGTCCG TGTTTACATC CGGACGATCT CGCACGTTTG
CTGGCGATCA GTCAGACAAG CACGGTGGGC GGTATTCTGG CCGCGCCGGT GCGCGACACC
ATGAAGCGTG CGGAACCAGG GCTGAATCAT ATTGCTCACA CCGTTGAGCG CGTTGATCTT
TGGCACGCGC TGACGCCCCA ATTTTTCCCT CGCGAACTGC TCCACGACTG CTTAACCCGT
GCGCTCAATG AAGGCGCAAC CATCACCGAT GAAGCCTCGG CGCTGGAATA TTGTGGTTTC
CATCCAGAGC TTGTAGAAGG ACGCGCTGAT AATATCAAAG TGACGCGCCC CGAAGATTTA
CAGCTCGCGG AATTTTATCT TACCCGTATG ACCTATCAGG AGAACGCATA A
|
|---|
| Protein sequence | MAVTISDVCA VVPAAGFGRR MQTECPKQYL SIGDKTILEH TVAALLANPR VTRVVIAISP
GDARFAALPL ANHPQITVVD GGTERADSVL AGIRAAGNVA WVLVHDAARP CLHPDDLARL
LAISQTSTVG GILAAPVRDT MKRAEPGLNH IAHTVERVDL WHALTPQFFP RELLHDCLTR
ALNEGATITD EASALEYCGF HPELVEGRAD NIKVTRPEDL QLAEFYLTRM TYQENA
|
|---|
| |