Gene Ent638_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_3117 
Symbol 
ID5111670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp3389762 
End bp3390211 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID640493316 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001177832 
Protein GI146312758 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.551902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.117652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTCTC GTAATCGGGA TCTTGCTGAA GAGCTGGTTC AGTCCACCTG CGTGCGCGCG 
CTCGAAAAGA GCGCGCAATA CTCGCCCGGC ACGCGTATCG ACCGATGGTT GTTCTCGATT
CTTCATTCGA TTTGGATCTC CGATCTCCGC GCTCGTCAGG TCAGAATGGG ACAGGGATTT
GTGCCCAGCG ACGAGCTTAT CGCCCCGGAT ACACATGGGC AGAATGAGGA TCGGATGCAC
TACCAAAAAA TTATGCAGAG CGTGAATGCC CTCCCGGAAG CGCAGCGTAA TGCGGTGTTT
TTGGTGTATG TCGAGGGATT TACGTATCAG GAGGCGGCAG ACACGCTGTC GGTGCCGATT
GGCACGATAA TGAGTCGGCT GGCAACGGCA CGGGCAACGC TTGCCAAATC GGCAGCCGTG
CGACCTGTGG CAAAGGAGAA ACGATCTTGA
 
Protein sequence
MLSRNRDLAE ELVQSTCVRA LEKSAQYSPG TRIDRWLFSI LHSIWISDLR ARQVRMGQGF 
VPSDELIAPD THGQNEDRMH YQKIMQSVNA LPEAQRNAVF LVYVEGFTYQ EAADTLSVPI
GTIMSRLATA RATLAKSAAV RPVAKEKRS