Gene Ent638_3089 details

Gene Information

• Locus tag: Ent638_3089
• Symbol: rimM
• ID: 5112628
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Enterobacter sp. 638
• Kingdom: Bacteria
• Replicon accession: NC_009436
• Strand: -
• Start bp: 3364826
• End bp: 3365359
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640493287
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_001177804
• Protein GI: 146312730
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.157411
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.0618284
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCAATA AAGCACCTGT TGAACCGATC GTATTGGGAA AAATGGGTTC TTGCTACGGT 
ATTCGTGGTT GGCTCAGAGT GTTTTCCTCC ACTGAAGACG CTGAAAGCAT TTTTGATTAC 
CAGCCCTGGT TTATCCAGAA AGGCGGTAAG TGGGAAGAGG TCGAGCTGGA AAGCTGGCGT 
CGCCACAATC AGGATATCGT GATCAAGCTG AAAGGCGTTG AAGATCGCGA TGCTGCGAAT 
CTCCTGACGA ATTGCGAAAT TGTCGTTGAT TCATCGCAGT TGCCAAAGCT TGACGATGGC 
TACTACTGGA AAGACCTTAT GGGTTGCCAG GTAGTAACCA CGGAAGGATA CGAGCTCGGT 
AAAGTCATTG ATATGATGGA AACGGGCTCA AATGACGTTC TCGTCATTAA GGCAAACCTG 
AAAGATGCAT TTGGCATCAA GGAGCGGTTG GTTCCGTTCC TCGATGGACA GGTTATCAAG 
AAAGTCGATC TCACTACTCG TACGATTGAA GTAGATTGGG ATCCTGGTTT TTAA 

 

Protein sequence

MSNKAPVEPI VLGKMGSCYG IRGWLRVFSS TEDAESIFDY QPWFIQKGGK WEEVELESWR 
RHNQDIVIKL KGVEDRDAAN LLTNCEIVVD SSQLPKLDDG YYWKDLMGCQ VVTTEGYELG 
KVIDMMETGS NDVLVIKANL KDAFGIKERL VPFLDGQVIK KVDLTTRTIE VDWDPGF