Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ent638_3074 |
Symbol | rluD |
ID | 5112613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Enterobacter sp. 638 |
Kingdom | Bacteria |
Replicon accession | NC_009436 |
Strand | - |
Start bp | 3351681 |
End bp | 3352661 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640493272 |
Product | 23S rRNA pseudouridine synthase D |
Protein accession | YP_001177789 |
Protein GI | 146312715 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.273549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0295932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAC GAGTAGAACT CACCGCAACA GTCTCCGAAA ATCAGCTCGG TCAACGCTTA GATCAAGCTT TGGCCGAAAT GTTCCCTGAT TATTCGCGTT CACGCATAAA AGAATGGATT CTTGACCAAC GAGTGATGGT CAACGGCAAA GTTTGGGACA CGCCAAAAGA GAAAGTGTTA GGTGGGGAAG TGGTCGCCAT CAATGCTGAA ATCGATGAAG AAGTCCGTTT TGAAGCACAA GATATCCCGC TTACCATCGT CTATGAAGAT GATGACATTC TGGTGATCAA CAAGCCTCGC GGCCTGGTTG TCCACCCGGG AGCGGGTAAT CCTGATGGTA CAGTGCTGAA TGCGCTGCTC CACTACTATC CACCGATCAC CGATGTACCG CGTGCAGGCA TCGTGCATCG TCTGGATAAA GACACAACCG GTTTGATGGT CGTCGCAAAA ACTGTTCCGG CGCAAACGCG CTTGGTGGAA TCGTTGCAGC TGCGTGAAAT CACCCGTGAA TATGAAGCGG TCGCGATTGG TCACATGACC TCAGGCGGTA CGGTAGAAGA GCCGATCAGC CGTCACCCGA CCAAACGCAC GCACATGTCA GTGCATCCGA TGGGGAAACC CGCGGTAACG CATTACCGCA TTATGGAACA TTTCCGCATT CATACGCGTT TGCGTTTGCG TCTGGAAACG GGCCGTACTC ACCAGATCCG TGTGCACATG TCGCACATTA CGCATCCGCT GGTAGGTGAT CAGGTTTATG GCGGACGCCC GCGTCCACCT AAAGGTGCTT CTGAAGAATT TATCAGTACC CTGCGTAAAT TTGATCGTCA GGCTTTGCAC GCCACTATGC TGCGCCTCTA TCACCCTATT ACAGGCATCG AGATGGAATG GCATGCGCCT ATTCCTCAGG ACATGGTCGA GCTCATCGAA GCGATGCGTG CAGATTTTGA AGAGCATAAG GATAAAGTGG ACTGGTTATG A
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Protein sequence | MAQRVELTAT VSENQLGQRL DQALAEMFPD YSRSRIKEWI LDQRVMVNGK VWDTPKEKVL GGEVVAINAE IDEEVRFEAQ DIPLTIVYED DDILVINKPR GLVVHPGAGN PDGTVLNALL HYYPPITDVP RAGIVHRLDK DTTGLMVVAK TVPAQTRLVE SLQLREITRE YEAVAIGHMT SGGTVEEPIS RHPTKRTHMS VHPMGKPAVT HYRIMEHFRI HTRLRLRLET GRTHQIRVHM SHITHPLVGD QVYGGRPRPP KGASEEFIST LRKFDRQALH ATMLRLYHPI TGIEMEWHAP IPQDMVELIE AMRADFEEHK DKVDWL
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