| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_2939 |
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| Symbol | ligA |
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| ID | 5111972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Enterobacter sp. 638 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009436 |
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| Strand | - |
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| Start bp | 3189895 |
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| End bp | 3191910 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640493133 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_001177654 |
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| Protein GI | 146312580 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000192646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0623801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCAA TCGAACAACA ACTGACACAG CTAAGAACCA CACTTCGCCA TCATGAATAT
CTTTATCATG TGATGGACGC CCCGGAAGTC CCGGATGCGG AATATGACCG CCTGATGCGT
GAGTTGCGCG AGCTGGAAGC GCAACACCCC GAATTAGTTA CGCCTGATTC CCCGACTCAA
CGCGTGGGCG CTGCGCCGCT GGCCTCCTTC AGTCAGGTGC GTCACGAAGT TCCTATGCTT
TCGCTGGACA ACGTGTTCGA TGAAGAGAGT TTTCTTGCGT TCAACAAGCG CGTCCAGGAC
CGGCTGAAAA GCGCGGATAC CCTGACCTGG TGCTGTGAGC TCAAGCTTGA CGGGTTGGCT
GTCAGTATTC TGTATGAAAA TGGTCTGCTG GTGCGCGCAG CTACGCGCGG CGATGGCACA
ACGGGCGAAG ATATCACCGC CAACGTACGG ACCATTCGCG CCATTCCATT AACGCTGCGT
GGCGACAACA TTCCCGCGCG TCTTGAAGTG CGTGGTGAGG TTTTCCTCCC GCAGAAGGGC
TTTGAGAAGA TCAACGACGA AGCGCGTCGC ACCGGCGGGA AAATTTTCGC TAACCCGCGT
AACGCCGCAG CAGGTTCATT GCGTCAGCTG GATCCACGCA TTACAGCGAA GCGACCGCTC
ACTTTCTTCT GCTACGGCGT CGGTATCCTG GAGGGGGGCG TATTGCCTGA TACCCATCTG
GGGCGTTTGC TGCAGTTTAA AGAGTGGGGC CTGCCGGTCA GCAACCGCGT ACAGCTGTGC
GACTCTCCCG AAGCCGTGCT GGCGTTTTAT CACAAAGTTG AAGAAGACCG CCCGTCGCTG
GGGTTTGATA TCGACGGCGT GGTGATCAAA GTGAATTCCT TGGCGCTTCA GGAACAGTTG
GGCTTTGTCG CCCGCGCGCC GCGCTGGGCT GTCGCGTTTA AATTCCCTGC GCAAGAGCAG
ATGACCTTTG TGCGCGACGT GGAGTTCCAG GTAGGACGCA CTGGCGCTAT CACACCGGTT
GCGCGCCTTG AGCCGGTGCA GGTCGCGGGC GTGCTGGTCA GCAACGCGAC TTTGCATAAT
GCCGACGAAA TTGCGCGCCT GGGCCTGCGT ATTGGCGATA AAGTCGTTAT CCGTCGTGCC
GGTGATGTCA TTCCGCAAGT CGTTAACGTC GTGGAGTCTG AGCGCCCTGA CGATACACGT
GAAATTGTTT TCCCCGCCCA TTGCCCCGTC TGTGGATCCG ATGTCGAACG TGTGGAGGGC
GAAGTGGTAA CGCGCTGCAC GGGCGGTTTG ATTTGTGGCG CTCAGCGCAA AGAGGCACTC
AAGCACTTTG TTTCGCGCCG AGCGTTAGAT GTGGACGGGA TGGGCGATAA AATCATCGAC
CAACTGGTTG AGAAAGAGTA TGTCCACACG CCTGCCGATC TGTTCCGCCT GAGCGCTGGC
AAGCTGACCG GACTCGACCG AATGGGACCG AAGTCCGCGC AAAACGTCGT CAACGCGCTA
GAGAAGGCTA AAGAAACGAC GTTTGCCCGC TTCCTGTATG CGCTGGGTAT TCGCGAAGTG
GGTGAGGCAA CGGCAGCAGG CCTGGCGGCT CATTTCGGTA CGCTTGAGCA ACTTGAAAAG
GCGACGATTG ACGACCTGCA AAAAGTGCCA GACGTCGGAA TTGTTGTCGC CACTCACGTC
TTTAACTTCT TTGCTGAAGA GAGTAACCGC GACGTGATCG GCAAACTGCT GGAAGAGGGC
ATTCACTGGC CCGCACCGGT GGTTATTAAT GTCGAAGAGA TCGACAGTCC ATTTGCCGGT
AAAACGGTGG TATTGACCGG CAGCCTGAGC CAGATGTCGC GAGACGATGC TAAAGCGCGT
CTGGTCGCAA TTGGTGCAAA AGTGGCGGGC AGCGTGTCGA AGAAAACCGA TCTGGTGATT
GCCGGAGAAG CGGCCGGTTC AAAACTGGCG AAGGCCCAGG AACTGGGTAT TGACGTGATT
GACGAAGCGG AAATGCTGCG TCTGTTTGGG GAATAG
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| Protein sequence | MDSIEQQLTQ LRTTLRHHEY LYHVMDAPEV PDAEYDRLMR ELRELEAQHP ELVTPDSPTQ
RVGAAPLASF SQVRHEVPML SLDNVFDEES FLAFNKRVQD RLKSADTLTW CCELKLDGLA
VSILYENGLL VRAATRGDGT TGEDITANVR TIRAIPLTLR GDNIPARLEV RGEVFLPQKG
FEKINDEARR TGGKIFANPR NAAAGSLRQL DPRITAKRPL TFFCYGVGIL EGGVLPDTHL
GRLLQFKEWG LPVSNRVQLC DSPEAVLAFY HKVEEDRPSL GFDIDGVVIK VNSLALQEQL
GFVARAPRWA VAFKFPAQEQ MTFVRDVEFQ VGRTGAITPV ARLEPVQVAG VLVSNATLHN
ADEIARLGLR IGDKVVIRRA GDVIPQVVNV VESERPDDTR EIVFPAHCPV CGSDVERVEG
EVVTRCTGGL ICGAQRKEAL KHFVSRRALD VDGMGDKIID QLVEKEYVHT PADLFRLSAG
KLTGLDRMGP KSAQNVVNAL EKAKETTFAR FLYALGIREV GEATAAGLAA HFGTLEQLEK
ATIDDLQKVP DVGIVVATHV FNFFAEESNR DVIGKLLEEG IHWPAPVVIN VEEIDSPFAG
KTVVLTGSLS QMSRDDAKAR LVAIGAKVAG SVSKKTDLVI AGEAAGSKLA KAQELGIDVI
DEAEMLRLFG E
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