Gene Ent638_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_2546 
Symbol 
ID5113813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp2740279 
End bp2741973 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content56% 
IMG OID640492732 
Productdiguanylate cyclase 
Protein accessionYP_001177266 
Protein GI146312192 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0032266 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCGCG ATACCTTTGT CATCAAGAAA AATCTGCTGG AACGGTTACG TCACCATCCT 
GGGCAAATCG TTAACGTATG TTTTCTGGTT GTCCTCATTG TTTCCACGAT TCTGACATGG
CGAGAAGTCG TCGTGCTGGA AGACGCGTAC ATCTCAAGCC AGCAAAACCA TCTGCAAAAC
GTGGCCAACT CGCTGGACCG GCAGCTTCAG TACAGTGTCA ATAAACTGCT CTTTTTCCGA
CAGAGCATGG GTGACGCACT GCAAACACCA CTTGGGCTGC GCGTCTTGCA CGATGCCGTC
CTGAGTTTTA ACCATTTACG CACTAAACCC TTCTGGCAGC TGGATGTGGA GCAGCGGCGA
GCGTTGCCGA TAAACGGCGT GTCAGATGGC ATGGTTGAGC GGACCACACT TCTGACACGC
GATGACCAAC GTCTCGGCGG GGAACTCTCT GCGGCGCTGG AAGTGGGCTA TTTGCTGCGC
CTTGCCGTCT CGCGCGCCAA TAATAAAGAA AAGCGCATCA CCTACGTCTC GCGTGCGGGC
TTTTTTGTGT CGACGGAACC CGCCGCGCTC AACAACTCCA TCGTTTCTCG TTACTACACT
CTGGTGACTC GCCCGTGGTT TACTCACCAG ACTGACCGCG ACAATCGCGC CCGCGCGGTG
CGCTGGTTTA TGGCTCCCGC TTCCGCATCA CAGAATGAAC GCCTGATCAC CGCCAGCGTG
CCGGTGTATC AGGACAACTA CTGGTACGGT GTGCTGGCGA TGGATTTCAC GCTTCCGACC
ATGACTCAGT TGCTGATGGA CGCCGTTGAT CAGCGCAAAG ACGGTGAATA CCAGCTGTAT
GACAATCGTC TCAATTTGAT TGCGACCTCT GAAGAAAACG CCGACAGCGT CATTCACTTT
GATGCGCAAG AGATCGCCCA AATCGCGCAG GCGGTGGAAA ACGATACACA AGGTGGCCTG
CGGTTAAGCA CGCGGTTTAT CAGTTGGGAA CGCCTGGAAC ATTTTGATGG TGTGGTGCTG
CGAGTCCACT CCCTCAAAGA CGGCGTGCGG GGGGAATTTG GCAGTATCAG TATTGCCCTG
GCGTCGTTAT GGGCGCTCTT TACCGCGACG CTGCTGATTT CGTGGCTGGT GATCCGTCGG
ATGGTGAGCA ACATGTTTAC GCTGCAAAAT TCATTGCAGT GGCAGGCCTG GCACGATCCA
TTGACCCGAC TCAACAACCG TCGTGCGCTC TTTGACCGGG CACAGGCGCT GGCCGAGGAG
TGCCGCCAGC AGCAACTGCC GTTCTCCGTC ATTCAGCTCG ATCTCGACCA TTTCAAAAGC
ATTAACGATC GCTTCGGTCA TCAGGCGGGT GACAAAGTGC TGTCCCACAC GGCCCGGCTG
ATTACGCACG CGCTACGAAG TAGCGATGTG GCGGGCCGAG TCGGCGGTGA GGAGTTTTGC
GTAGTGCTGC CGGGCGCGAC AGCGGAGCAG GCGGCCGGTG TGGCGGAGCG CATTCGGGTG
TCTATTAACC GAAAAGAGAT ACTGGTGAAG AAGAGCACCA CGGCGCGGGT CAGCGCCTCG
CTTGGCGTCA GCAGCACGGA AGAGAACGCC AATTTCGATT TTGAGCAATT GCAGTCCATT
GCCGATGCGC GTCTTTATCT GGCGAAACAG CAGGGCAGAA ATCAGGTGGT GTGTCGCGGC
CCGGATAAAA AGTGA
 
Protein sequence
MQRDTFVIKK NLLERLRHHP GQIVNVCFLV VLIVSTILTW REVVVLEDAY ISSQQNHLQN 
VANSLDRQLQ YSVNKLLFFR QSMGDALQTP LGLRVLHDAV LSFNHLRTKP FWQLDVEQRR
ALPINGVSDG MVERTTLLTR DDQRLGGELS AALEVGYLLR LAVSRANNKE KRITYVSRAG
FFVSTEPAAL NNSIVSRYYT LVTRPWFTHQ TDRDNRARAV RWFMAPASAS QNERLITASV
PVYQDNYWYG VLAMDFTLPT MTQLLMDAVD QRKDGEYQLY DNRLNLIATS EENADSVIHF
DAQEIAQIAQ AVENDTQGGL RLSTRFISWE RLEHFDGVVL RVHSLKDGVR GEFGSISIAL
ASLWALFTAT LLISWLVIRR MVSNMFTLQN SLQWQAWHDP LTRLNNRRAL FDRAQALAEE
CRQQQLPFSV IQLDLDHFKS INDRFGHQAG DKVLSHTARL ITHALRSSDV AGRVGGEEFC
VVLPGATAEQ AAGVAERIRV SINRKEILVK KSTTARVSAS LGVSSTEENA NFDFEQLQSI
ADARLYLAKQ QGRNQVVCRG PDKK