| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_2181 |
|---|
| Symbol | |
|---|
| ID | 5112873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | + |
|---|
| Start bp | 2371633 |
|---|
| End bp | 2373624 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640492368 |
|---|
| Product | RNase II stability modulator |
|---|
| Protein accession | YP_001176907 |
|---|
| Protein GI | 146311833 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00276855 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACG ATATGGAGCA AAATTTGCTG TTTCGTTACA TGGGCACCCA CAGTCCCTGG
TGGCGGTTGG CAGCGGACAG CAATGCTCTG CATCTGGCCG CAAGCGAAAA TGCTGATATC
ACACAAGTGG TCGCCCTGAG TGACGAGCAA GCCGACATTG TTCGTCAGTT GACGGTGATC
ACCTCCAGCG TCACTATGAC CCTTTCTCTT TATGGTGTTG ATGTCCCGCT TCATCTCGTG
GGCCGCAAAA TCAATAAAAA AGAGTGGGCA GGCACCGCTT CAGCGTGGAA TGACACCCCT
TCTGTCGCAC GCGATCTGGT ACAAAGCTTG TCCTTCGCCG AACAGGTGGT ATCCGAAGCC
AACTCCGTCA TTGTTATCCT GGACCAGCAC GGTAATATTC AGCGCTTCAA TCGTTTGAGT
GAAGAATATA CGGGCCTGAA AGAACAGGAA GTCATCGGAC AAAACGTTTT TAAACTGTTC
ATGAGCCGCA GTGAAGCAGC CGCCTCTAAG CGCAACATCT CGGGTTTTTT CCGTAATGGC
AGCTCGTATG AAGTGGAGCG CTGGATTAAA ACGCGCAAAG GCCAGCGGTT ATTTCTGTTC
AGAAATAAAT TCGTGCACAG CGGCAGCGGT AAAAATGAAA TCTTCCTTAT CTGCTCGGGC
ACCGATATCA CAGAAGAGCG TCGGGCACAG GAGCGACTTC GGGTTCTGGC GAATACTGAC
ACCATTACGG GCCTGCCAAA CCGTAATGCG ATCCACGAAT TAATCAGCGA CAGCATTTCT
CAGCGCGGTG AAACTCAAGT TGGGGTGGTG TATCTCGATC TCGATAATTT TAAGAAGGTA
AACGATGCCT ACGGGCATAT GTTTGGCGAC CAACTGCTGC AGTCCGTCGC ATTAGCCATT
TTAAGCTGTC TGGATGAAGG CCAGGTGCTG GCTCGTCTTG GGGGCGATGA ATTTATCGTT
CTGGCTACCG ACACGTCACA GAGCACGCTT GAGGCGATGG CATCGCGCAT CCTGACGCGT
TTGCGTCAGC CTTTCCGCAT CGGTCTTATC GAGATTTATA CCGGTTGTTC GCTTGGGATC
TCCCTTGCGC CACAGCATGG TACGGATCGC GAAAGTATTA TTCGTAACGC GGATACCGCG
ATGTATACGG CCAAAGAAAG TGGCCGCGGT AAGTTCTGCG TATTCTCGCC GGAAATGAAC
CAGCGTGTTT TCGAATATCT GTGGCTGGAC ACCAACCTGC GTAGAGCGCT GGATAAGGAT
CAGCTCTTAA TCCACTATCA GCCCAAAATA ACGTGGCGTG GCGAAGTCAG AAGCCTGGAA
GCGCTGGTAC GCTGGCAGTC GCCGGAACGC GGTTTGATTC CACCCCTTGA GTTTATCTCT
TATGCCGAAG AATCTGGGCT GATTGTGCCC CTTGGCCGCT GGGTCATGCT GGACGTGGTG
CGCCAGGTCG CGAAGTGGCG TGACAAAGGG ATCAACCTGC GCGTCGCCGT TAACGTTTCA
GCGCGTCAGC TCGCCGACCA GACTATTTTC AGTGATTTAA AACAGGCGCT GAAAGATCTC
AATTTCGAAT ATTGCCCGAT CGATGTCGAA TTGACGGAGA GCTGTTTGAT TGAAAATGAA
GAGCTGGCGC TGTCGGTTAT TCAGCAATTC AGTAAGCTCG GGGCGCAGAT CCATCTTGAT
GATTTCGGCA CCGGTTATTC CTCTTTATCC CAGCTGGCCC GTTTCCCTAT TGACGCGATT
AAGCTCGATC AGGTGTTTGT GCGTGATATT CACAAACAGT CTATCTCCCA GTCGTTGGTA
CGAGCGATTG TGGCCGTTGC TCAGGCGCTG AATTTGCAGG TCATTGCGGA AGGCGTAGAG
AGCGCGAAAG AAGACGCCTT TCTGACCAAG AACGGCGTCA ACGAACGGCA AGGTTTTCTG
TTTGCAAAGC CGATGCCCGC TGCCGCATTC GAGCGGTGGT TTAAGCGCTA TCAGGCTAAA
AAATTGCGCT AA
|
|---|
| Protein sequence | MIDDMEQNLL FRYMGTHSPW WRLAADSNAL HLAASENADI TQVVALSDEQ ADIVRQLTVI
TSSVTMTLSL YGVDVPLHLV GRKINKKEWA GTASAWNDTP SVARDLVQSL SFAEQVVSEA
NSVIVILDQH GNIQRFNRLS EEYTGLKEQE VIGQNVFKLF MSRSEAAASK RNISGFFRNG
SSYEVERWIK TRKGQRLFLF RNKFVHSGSG KNEIFLICSG TDITEERRAQ ERLRVLANTD
TITGLPNRNA IHELISDSIS QRGETQVGVV YLDLDNFKKV NDAYGHMFGD QLLQSVALAI
LSCLDEGQVL ARLGGDEFIV LATDTSQSTL EAMASRILTR LRQPFRIGLI EIYTGCSLGI
SLAPQHGTDR ESIIRNADTA MYTAKESGRG KFCVFSPEMN QRVFEYLWLD TNLRRALDKD
QLLIHYQPKI TWRGEVRSLE ALVRWQSPER GLIPPLEFIS YAEESGLIVP LGRWVMLDVV
RQVAKWRDKG INLRVAVNVS ARQLADQTIF SDLKQALKDL NFEYCPIDVE LTESCLIENE
ELALSVIQQF SKLGAQIHLD DFGTGYSSLS QLARFPIDAI KLDQVFVRDI HKQSISQSLV
RAIVAVAQAL NLQVIAEGVE SAKEDAFLTK NGVNERQGFL FAKPMPAAAF ERWFKRYQAK
KLR
|
|---|
| |