Gene Ent638_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_2115 
Symbol 
ID5112236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp2296231 
End bp2297613 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content50% 
IMG OID640492302 
Productglycoside hydrolase family protein 
Protein accessionYP_001176841 
Protein GI146311767 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5434] Endopolygalacturonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.698414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTC GTACTCTCCC TCTGTGGGTC GCGGCGGCGG CTGTCGGCAT ATTACCTTTT 
CACCTCGCGC AGGCAGCGAG TTCAGTAAAG TTTCCGGATA AAGTTTGTAA TATCACGCAA
TACGGAGCTG AAGGCCATCG CCTGCAAATT GCGCTGAATA CTGAGGCCAT TCAAAAAGCC
ATTGATGATT GCGCTGCCGC GGGCGGCGGG ACCGTTCTGG TGCCGAAGGG CAATTTCTTA
ACCAATCCGC TGTTTCTGAA AAGCAACATT CAGCTGAAGT TGGAAAAAGA CGCCACGCTG
GTGGCTTCAA CCGAAGTCGC TGCATATCGT GCAGATGATA AATCGAAATA TGCCGAAGCG
GAAAACGGCT GGCTGCCGTT TATCAGTATT GCAGACGCGC AAAACGTCGC TATCGTCGGT
GAAGGAACCA TCGACGGCCA GGGTGCAGTG TGGTGGGAGC GCTGGAGAGA AAACATCCGC
GCGACCGGTA AAAAAGGCGG TACCGACCGT CCACGGCTGA TTTACATCAC GCGTTCACAT
AACGTTCTGA TCGATGGCGT CACATTAACC CATTCGCCAA GCTTCCACGT CGTGACTCGC
TATGCGCACG ATGTTGATAT CAACGGTACG CGAATTCTTT CTCCATGGCA TGCGCCAAAT
ACGGACGCCA TTGATCCTAT CGACAGTCAG AATATTCGTA TCACCAATAA CTATATCGAT
TGCAATGACG ATCATATCGC CATCAAAGCT GAAAAAGCCG ATCCCCGTTT CCCGGATGGC
GTGGTGGATA ACATCTATAT TGCCAATAAT ACCTTGAAAC AAGGCCGCGG AATTTCCATT
GGCAGTGAAA GTGCAGGCGG CGTGAATAAC GTGTTAGTGG AAAATAATAC CTTTGAAGGA
TCGATGTACG GCATCCGAAT TAAAAGTCCG CGCGGGAAGG GCGGTGAGGT AAAAAATATT
GTGTATCGCA ACACCAAAAT GCACAACGTC GAAGTACCCC TTGTCTTTTC CGCCTATTAT
AAAGCCGCGC CTATTGTTGA AGCTGAAGTT GAAAAATTGC TTAAGGAGGG CGGTTTTACG
CTCGGCGAAC AAATTTATCC GCCAGACAGC GATCCAAAAC AGCCCTTCGA CAAATATAAA
ACGCCGCACT TCAGTAATAT CACCGTGGAG AATTTAACCT CTACTGGCGA TAGCAAAGCG
GCCGCCTATA TCATTGGTAC GCCGGAAGCC CCGCTCAGCG GTTTCCACTT TACGAATGTC
AATATTGAGG CCGCCCAGGG ACTGCGGATT CGTCATGCCG AACTGGAAAC CAAAGGGCTT
AATCTGAGCG TGAAAGAAGG GCAGAAGATT AAGAAAGATG CTGGCGCTAT CGTTCAAGAA
TAA
 
Protein sequence
MSTRTLPLWV AAAAVGILPF HLAQAASSVK FPDKVCNITQ YGAEGHRLQI ALNTEAIQKA 
IDDCAAAGGG TVLVPKGNFL TNPLFLKSNI QLKLEKDATL VASTEVAAYR ADDKSKYAEA
ENGWLPFISI ADAQNVAIVG EGTIDGQGAV WWERWRENIR ATGKKGGTDR PRLIYITRSH
NVLIDGVTLT HSPSFHVVTR YAHDVDINGT RILSPWHAPN TDAIDPIDSQ NIRITNNYID
CNDDHIAIKA EKADPRFPDG VVDNIYIANN TLKQGRGISI GSESAGGVNN VLVENNTFEG
SMYGIRIKSP RGKGGEVKNI VYRNTKMHNV EVPLVFSAYY KAAPIVEAEV EKLLKEGGFT
LGEQIYPPDS DPKQPFDKYK TPHFSNITVE NLTSTGDSKA AAYIIGTPEA PLSGFHFTNV
NIEAAQGLRI RHAELETKGL NLSVKEGQKI KKDAGAIVQE