Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ent638_1629 |
Symbol | |
ID | 5112074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Enterobacter sp. 638 |
Kingdom | Bacteria |
Replicon accession | NC_009436 |
Strand | - |
Start bp | 1780128 |
End bp | 1783574 |
Gene Length | 3447 bp |
Protein Length | 1148 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640491818 |
Product | transcription-repair coupling factor |
Protein accession | YP_001176359 |
Protein GI | 146311285 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.027535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAAC AATATCGTTA TTCCTTGCCC GGCAAAGCGG GCGACCAACG TCAGCTAGGT GAACTGACGG GTGCAGCCTG CGCCACGCTT GTGGCGGAGA TCGCTGAGCG CCATGCGGGT CCGGTGGTCC TGGTAGCCCC GGATATGCAA AACGCATTGC GTCTGCACGA CGAAATTCGC CAGTTTACCG ACAGTCTGGT CTTTAACCTG GCCGACTGGG AAACGCTGCC GTACGACAGC TTCTCCCCGC ACCAGGAGAT CATCTCCTCG CGCCTGTCGA CTCTGTATCA GTTGCCGACC ATGCAGCGCG GCGTATTGAT TGTCCCAGTG AATACGTTGA TGCAGCGCGT GTGTCCGCAC AGCTATCTGC ACGGTCACGC GCTGGTGATG AAAAAAGGTG AACGGTTATC GCGCGACGCC CTGCGTTCGC AGCTTGATAG CGCCGGTTAT CGCCATGTCG ATCAGGTGAT GGAGCACGGC GAATACGCCA CGCGCGGTGC GCTGTTGGAT CTGTATCCGA TGGGCAGTGA CCAGCCGTAT CGCCTGGATT TCTTCGACGA TGAAATCGAC AGTCTGCGCG TGTTTGACGC CGATACCCAG CGCACGCTGG AGGAAGTCGA TGCCATCAAT TTACTGCCTG CGCATGAATT CCCAACGGAT AAAACCGCCA TCGAGTTGTT CCGCAGCCAG TGGCGCGACA AGTTTGATGT GAAGCGCGAC GCCGAACATA TTTACCAGCA GGTGAGCAAA GGCACGCTGC CTGCGGGGAT TGAATACTGG CAGCCGCTGT TCTTTAGCGA GCCACTTCCC GCGCTGTTCA GCTATTTCCC GGCGAAAACG CTGATTGTGA ACACCGGCGA TCTGGAATCC AGTGCAACCC GTTTTGAAAA CGAAACCCGT GCGCGATTCG AAAACCGTGG CGTTGATCCG ATGCGCCCCC TGCTGCCACC GGAACAGCTT TGGCTACGCA CCGACGCGCT GTTTTCAGAA CTCAAAAAAT GGCCGCGCGT GCAGCTCAAA ACGGAAAATC TGCCTGAGAA AGCCGCCAAT ACCAATCTCG GATTCGAGAA ACTGCCCGAT CTTTCCGTTC AGGCGCAGCA AAAATCGCCG CTGGATAATC TGCGCAAGTT CCTGGAATCC TTCACCGGTC CGGTGATTTT CTCGGTCGAG AGTGAAGGCC GCCGTGAAGC GCTGGGCGAA CTGCTCGCGC GAATCAAAGT GTCGCCAAAA CGCATTTTAC GCCTCGACGA AGCGACCGAT GCCGGGCGCT ACCTGATGAT TGGTGCGGCT GAGCATGGAT TCATCGACAC GCTGAATAAT CGCGCGCTGA TTTGTGAAAG CGATCTGCTC GGCGAGCGCG TGGCGCGCCG TCGTCAGGAC AGCCGTCGCA CCATTAACCC GGATACGCTG ATTCGCAACC TGGCGGAGCT GCACGTGGGC CAGCCGATCG TGCATCTCGA GCACGGCGTG GGGCGTTACG CGGGAATGAC CACGCTGGAA ACGGGCGGCA TTAAGGGCGA ATACCTGATG CTCACCTATT CCGGCGATGC CAAACTCTAC GTTCCGGTGT CTTCGCTGCA TCTGATTAGC CGTTATGCGG GTGGTGCAGA AGATAACGCC CCGCTGCACA GGCTGGGCGG TGATGTCTGG GCGCGCGCGC GTCAGAAAGC CGCCGAAAAA GTCCGCGATG TGGCGGCAGA ATTGCTGGAT ATTTACGCCC AGCGTGCCGC GAAATCAGGC TACGCGTTCA AGCACGACAA GGAACAATAT CAATTGTTCT GCGACAGTTT CCCGTTTGAA ACCACGCCCG ATCAGGCGCA GGCGATAAAC GCCGTGCTAA GCGACATGTG CCAGCCGCTG GCGATGGATC GCCTGGTGTG CGGTGACGTG GGCTTTGGTA AAACCGAAGT CGCGATGCGC GCCACCTTCC TGGCGGTCGA AAATAACAAG CAGGTCGCCG TGCTGGTGCC GACCACGCTG CTCGCCCAGC AGCACTACGA CAACTTCCGC GATCGCTTCG CCAACTGGCC GGTGCGGATC GAGATGCTGT CGCGTTTTCG CAGTGCCAAA GAGCAAACAC AGATCCTGGA ACAGGCCCGC GAAGGCAAAA TCGATATCCT GATCGGCACC CATAAATTGC TGCAAAGCGA CGTGAAGTGG AAAGATTTGG GCCTGCTGAT CGTCGATGAA GAGCACCGCT TCGGCGTACG CCACAAAGAG CGCATCAAAG CGATGCGCGC GGACGTGGAT ATTCTGACCC TCACCGCGAC GCCGATCCCG CGTACCCTGA ATATGGCGAT GAGCGGCATG CGCGATCTGT CGATCATTGC CACGCCACCG GCGCGTCGTC TGGCGGTGAA AACGTTTGTC CGCGAGTACG ATAGCCTGGT GGTTCGCGAA GCAATCCTGC GTGAAGTGCT GCGTGGCGGG CAGGTTTATT ATCTCTTTAA CGATGTCGAA AACATTCAGA AAACCGCCGA TAAACTGGCT GAACTGGTGC CAGAGGCCCG CATTGCCATC GGTCATGGGC AGATGCGCGA GCGCGAGCTG GAACGGGTGA TGAACGATTT CCACCACCAG CGTTTTAACG TGCTGGTGTG TACCACGATT ATTGAAACCG GTATCGACAT TCCGACGGCG AACACCATCG TTATTGAACG TGCGGATCAC TTCGGTCTGG CGCAGCTTCA TCAGTTGCGC GGTCGCGTTG GGCGCTCGCA TCATCAGGCT TACGCATGGC TGATGACGCC GCATCCGAAA GCGATGACCA CCGACGCGCA AAAACGTCTT GAAGCCATCG CCTCGCTGGA AGATTTGGGG GCAGGTTTCG CGCTGGCGAC ACACGATCTC GAGATTCGTG GCGCTGGCGA ATTGCTGGGT GAAGATCAGA GCGGGTCCAT GGAAACCATC GGTTTCTCGT TGTACATGGA GCTACTGGAA AATGCTGTTG ATGCGTTGAA AGCTGGGCGC GAGCCGTCGC TTGAGGATCT CACCAGCCAG CAAACGGAGG TCGAACTGCG CATGCCGTCC CTGTTGCCTG ATGATTTTAT CCCGGACGTG AACACGCGCC TGTCGTTCTA TAAGCGAATT GCCAGCGCCA AAAAAGAATC TGAGCTTGAA GAAATCAAGG TTGAGCTCAT TGACCGCTTT GGTTTGCTGC CGGATCCGGC GCGTAACCTG CTCGACATCG CCCGACTGCG TCAGCAGGCG CAGAAGCTGG GTATCCGCAA GCTTGAAGGG AATGAGAAAG GCGGGACGGT TGAATTTGCT GAGAAAAACC ATGTCGATCC GATGTGGCTG ATCGGTTTGT TGCAGAAGCA ACCACAGCAT TTCCGCCTGG ATGGCCCGAC GCGTCTGAAG TTTACGCAGG AACTGGCCGA CCGGAAAACC CGCATGGAAT GGGTGCGCAA CTTTATGCGT CAACTGGAAG AAAACACGGT AGCGTAG
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Protein sequence | MPEQYRYSLP GKAGDQRQLG ELTGAACATL VAEIAERHAG PVVLVAPDMQ NALRLHDEIR QFTDSLVFNL ADWETLPYDS FSPHQEIISS RLSTLYQLPT MQRGVLIVPV NTLMQRVCPH SYLHGHALVM KKGERLSRDA LRSQLDSAGY RHVDQVMEHG EYATRGALLD LYPMGSDQPY RLDFFDDEID SLRVFDADTQ RTLEEVDAIN LLPAHEFPTD KTAIELFRSQ WRDKFDVKRD AEHIYQQVSK GTLPAGIEYW QPLFFSEPLP ALFSYFPAKT LIVNTGDLES SATRFENETR ARFENRGVDP MRPLLPPEQL WLRTDALFSE LKKWPRVQLK TENLPEKAAN TNLGFEKLPD LSVQAQQKSP LDNLRKFLES FTGPVIFSVE SEGRREALGE LLARIKVSPK RILRLDEATD AGRYLMIGAA EHGFIDTLNN RALICESDLL GERVARRRQD SRRTINPDTL IRNLAELHVG QPIVHLEHGV GRYAGMTTLE TGGIKGEYLM LTYSGDAKLY VPVSSLHLIS RYAGGAEDNA PLHRLGGDVW ARARQKAAEK VRDVAAELLD IYAQRAAKSG YAFKHDKEQY QLFCDSFPFE TTPDQAQAIN AVLSDMCQPL AMDRLVCGDV GFGKTEVAMR ATFLAVENNK QVAVLVPTTL LAQQHYDNFR DRFANWPVRI EMLSRFRSAK EQTQILEQAR EGKIDILIGT HKLLQSDVKW KDLGLLIVDE EHRFGVRHKE RIKAMRADVD ILTLTATPIP RTLNMAMSGM RDLSIIATPP ARRLAVKTFV REYDSLVVRE AILREVLRGG QVYYLFNDVE NIQKTADKLA ELVPEARIAI GHGQMREREL ERVMNDFHHQ RFNVLVCTTI IETGIDIPTA NTIVIERADH FGLAQLHQLR GRVGRSHHQA YAWLMTPHPK AMTTDAQKRL EAIASLEDLG AGFALATHDL EIRGAGELLG EDQSGSMETI GFSLYMELLE NAVDALKAGR EPSLEDLTSQ QTEVELRMPS LLPDDFIPDV NTRLSFYKRI ASAKKESELE EIKVELIDRF GLLPDPARNL LDIARLRQQA QKLGIRKLEG NEKGGTVEFA EKNHVDPMWL IGLLQKQPQH FRLDGPTRLK FTQELADRKT RMEWVRNFMR QLEENTVA
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