| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_1600 |
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| Symbol | rne |
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| ID | 5112045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Enterobacter sp. 638 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009436 |
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| Strand | - |
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| Start bp | 1750705 |
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| End bp | 1753851 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640491789 |
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| Product | ribonuclease E |
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| Protein accession | YP_001176330 |
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| Protein GI | 146311256 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000427165 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA TGTTAATCAA CGCAACTCAG CAAGAAGAGC TGCGTGTCGC CCTTGTGGAT
GGGCAGCGCC TGTACGATCT GGATATTGAA AGTCCTGGAC ACGAACAGAA AAAAGCGAAC
ATTTACAAAG GCAAAATCAC CCGCATTGAA CCAAGCCTGG AGGCCGCTTT CGTCGATTAC
GGCGCTGAGC GTCACGGTTT CCTTCCTCTG AAAGAAATTG CCCGCGAATA TTTCCCTGCC
AACTATAACT CCCATGGTCG TCCGAACATC AAAGATGTGC TGCGCGAAGG CCAGGAAGTC
ATTGTTCAGA TTGATAAAGA AGAACGCGGC AACAAAGGTG CTGCGCTGAC AACCTTTATC
AGCCTGGCGG GTAGTTATCT GGTACTGATG CCAAACAACC CGCGTGCGGG TGGTATCTCT
CGCCGTATTG AAGGCGACGA TCGTACCGAG CTGAAAGAGG CGTTGGCCAG TCTTGAATTG
CCTGATGGCA TGGGTCTGAT TGTACGTACT GCAGGCGTCG GTAAATCTGC CGAAGCGTTG
CAGTGGGACT TAGGATTCCG TCTGAAGCAC TGGGAAGCCA TCCAGAAAGC TGCAGAAAGC
CGTCCGGCTC CGTTCCTGAT TCACCAGGAA AGTAACGTTA TCGTTCGTGC TTTCCGTGAT
TATCTTCGTC AGGACATCGG TGAGATTCTG ATCGATAACC CGAAAGTGCT TGAGCTGGCG
CGCCAGCATA TCGCTGCACT GGGCCGTCCA GATTTCACCA GCAAAATCAA ACTGTACACC
GGAGAAATCC CGCTGTTCAG CCACTATCAG ATCGAATCGC AGATTGAGTC CGCTTTCCAG
CGTGAAGTAC GTCTTCCTTC TGGCGGTTCC ATCGTTATCG ATTCGACCGA AGCACTGACC
GCTATCGACA TCAACTCCGC ACGCGCAACC CGCGGCGGCG ATATCGAAGA AACCGCGTTC
AACACCAACC TTGAAGCCGC AGATGAAATT GCCCGTCAGC TTCGTCTGCG CGACCTCGGT
GGTCTGATCG TTATCGACTT TATCGACATG ACGCCTGTGC GCCACCAGCG CGCCGTGGAA
AACCGTCTGC GTGATGCGGT TCGTCAGGAT CGTGCTCGTA TCCAGATCAG CCATATTTCT
CGCTTTGGTC TTCTGGAGAT GTCACGTCAG CGTCTGAGTC CTTCTCTGGG TGAATCCAGC
CACCACGTCT GCCCGCGCTG TAGCGGTACA GGTACCGTGC GTGACAACGA ATCACTTGCA
CTCTCCATTC TGCGTCTCAT CGAAGAAGAA GCGCTGAAAG AGAACACCAA AGAAGTTCAC
GCTATTGTTC CGGTTCCAGT GGCCTCTTAC CTGCTGAACG AAAAACGTGA AGCAGTCAGT
GCCATTGAAG CACGCCAGGC TGGGGTGCGT TGCATCATCG TTCCAAACGA TCAGATGCAA
ACTCCGCACT ACTCCGTGCT TCGCGTACGC AAAGGTGAAG AGACATCAAC TCTGAGCTAC
CTGTTGCCGA AACTACACGA AGAAGAGATG GCGATGCCTT CTGATGAAGA GCCTGCGGAG
CGTAAACTCC CTGAGCAGCC AGCATTGGCC ACCTTCATCA TGCCCGAAGC ACCTCCGGCA
CCTTCTGAGC AGGAAGCGAC CGTTAAACCT GCAGTGCAGA AATCTGAAAC CGAAGCTCGC
GTGACGTCTT CAGAACCGGG TCTGCTGGGT CGTATCTTCA GCGCGCTGAA GAAAATGTTC
GCGGGTGAAG AAGCTCAGCC TGAAGAGCCG AAAGCGGCTC CGAAAGAAGA GAAACAAGAG
CGTCCGCAGC AGGACCGTCG TAAGCGTCAG AACAATCGCC GCGATCGTAA CGACCGCCGT
GACAACCGCG ATAATCGTGA TAACCGCGAC AACCGTGATA ATCGTTCTGA AAACAACGAA
GGTCGTGAAG CGCGCGAAGA CAATCGTCGC AACCGTCGCG AAAAACCGCA GCAGAATGCG
GAAGATCGTG AAATCCGCCA GCCAGCGGGC GATGAGTCTG AAAAATCCAG ACAGCGTGAC
GAGCAGCAGC CACGTCGTGA GCGTAACCGT CGTCGTAATG ACGATAAGCG CCAGGCGCAG
CAGGAAGTTA AAGCCGTTAC TCTTGAAGAG CCAGTTGTCC AGGAAGCTGA GCAGGAAGAA
CGCGTCCAGG TCATGCCGCG TCGTAAGCAG CGCCAACTGT CGCAGAAAGT TCGTTTCGAA
TCTGAACAAA CTGAAGCTGC AACGACCGCT GTGAGCGAAC CTGCTGTTGA AGAATCGCAG
AACACGCAAC TGGCAAAACT GGATCTTCCT GCTGTCGTTG AGCCAACACA TGAGCAAGAC
GATAATGCGG AAGCCCGTGA TAACAATGGT ATGCCACGTC GTTCCCGTCG CTCTCCGCGC
CACCTGCGCG TGAGCGGTCA GCGTCGTCGT CGCTATCGTG ACGAGCGTTA CCCGACGCAG
TCACCGATGC CAATGACCGT TGCCTGCGTG TCGCCAGAAA TGGCTTCCGG TAAAGTGTGG
ATCCGCTATC CGATTGCCCG TCCTCAGGAT CAGCAATTTG AAGAGCAGAC TGTAGTTGAA
ACCGTTGAGC CAATGGTCGC TGCGCCTGTT GCGGTTGAAG AAGTGCAACA CGTCGTGGCT
GAACCGCAGA CAGTTGAAAC GGTTGAAGTT GAAACTACGC ATCCGGAAGT GATCGCAGCG
CCGGTTGATG CTCAACCTCA GGTTATCGCG CAACAAGATG CTGCTGTTGC TGAGCAAATC
GCTGAAGCCG CTGAACCTGC AACGCCAACT GACACGTTCG TGGAACAGCC TGCTGTTGCC
GAAGTGAAAG CAGACATTGT GGCAGACGTG GAAGCTGAAG CCGTGGCAGA TGTTGTCACT
GAAGCTGAAC AACCTGCGCC TGCCGTCGTT GCAGAGCAGC CTGTTGTTGA AGTGAAGCCA
CAGCCAGCTG CACCTGCTGT TGTCGGTAAT CACTACGCGA CAGCACCGAT GACGCGTGCT
CCAGCACCGG AATATCAGCC AGAAGCGCCA CGTCAGAGTG ACTGGGTGCG TCCTGCGTTC
GATTTCGAAG GTAAAGGTTC TGCGGGTGGC CATAGCGCTA CTCATCAGGC AACGGCACCG
GCAACGCGTC CGCAGTCTGC TGAGTAA
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| Protein sequence | MKRMLINATQ QEELRVALVD GQRLYDLDIE SPGHEQKKAN IYKGKITRIE PSLEAAFVDY
GAERHGFLPL KEIAREYFPA NYNSHGRPNI KDVLREGQEV IVQIDKEERG NKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDDRTE LKEALASLEL PDGMGLIVRT AGVGKSAEAL
QWDLGFRLKH WEAIQKAAES RPAPFLIHQE SNVIVRAFRD YLRQDIGEIL IDNPKVLELA
RQHIAALGRP DFTSKIKLYT GEIPLFSHYQ IESQIESAFQ REVRLPSGGS IVIDSTEALT
AIDINSARAT RGGDIEETAF NTNLEAADEI ARQLRLRDLG GLIVIDFIDM TPVRHQRAVE
NRLRDAVRQD RARIQISHIS RFGLLEMSRQ RLSPSLGESS HHVCPRCSGT GTVRDNESLA
LSILRLIEEE ALKENTKEVH AIVPVPVASY LLNEKREAVS AIEARQAGVR CIIVPNDQMQ
TPHYSVLRVR KGEETSTLSY LLPKLHEEEM AMPSDEEPAE RKLPEQPALA TFIMPEAPPA
PSEQEATVKP AVQKSETEAR VTSSEPGLLG RIFSALKKMF AGEEAQPEEP KAAPKEEKQE
RPQQDRRKRQ NNRRDRNDRR DNRDNRDNRD NRDNRSENNE GREAREDNRR NRREKPQQNA
EDREIRQPAG DESEKSRQRD EQQPRRERNR RRNDDKRQAQ QEVKAVTLEE PVVQEAEQEE
RVQVMPRRKQ RQLSQKVRFE SEQTEAATTA VSEPAVEESQ NTQLAKLDLP AVVEPTHEQD
DNAEARDNNG MPRRSRRSPR HLRVSGQRRR RYRDERYPTQ SPMPMTVACV SPEMASGKVW
IRYPIARPQD QQFEEQTVVE TVEPMVAAPV AVEEVQHVVA EPQTVETVEV ETTHPEVIAA
PVDAQPQVIA QQDAAVAEQI AEAAEPATPT DTFVEQPAVA EVKADIVADV EAEAVADVVT
EAEQPAPAVV AEQPVVEVKP QPAAPAVVGN HYATAPMTRA PAPEYQPEAP RQSDWVRPAF
DFEGKGSAGG HSATHQATAP ATRPQSAE
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